RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EMID1Q96A84 441 aaPredicted RBP17.75■□□□□ 0.43
VTI1A-203ENST00000472892 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 PBX4Q9BYU1 374 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 ZNF576Q9H609 170 aa17.75■□□□□ 0.43
VTI1A-203ENST00000472892 SCN10AQ9Y5Y9 1956 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 MMP3P08254 477 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 PBX2P40425 430 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 FAM47CQ5HY64 1035 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 CATIPQ7Z7H3 387 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 SCLYQ96I15 445 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 PDCD2LQ9BRP1 358 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
VTI1A-203ENST00000472892 LSG1Q9H089 658 aaKnown RBP17.74■□□□□ 0.43
VTI1A-203ENST00000472892 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
VTI1A-203ENST00000472892 GCOM1H8Y6P7 765 aaPredicted RBP17.73■□□□□ 0.43
VTI1A-203ENST00000472892 RGS20O76081 388 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 POLR2MP0CAP2 368 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
VTI1A-203ENST00000472892 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
VTI1A-203ENST00000472892 LAMC2Q13753 1193 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 OTOP2Q7RTS6 562 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 PPP1R13LQ8WUF5 828 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 KAT2BQ92831 832 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 MRVI1Q9Y6F6 885 aa17.73■□□□□ 0.43
VTI1A-203ENST00000472892 MYH6P13533 1939 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 PFKMP08237 780 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 FOSL2P15408 326 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 SMARCA1P28370 1054 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 PGM5Q15124 567 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 DGKDQ16760 1214 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 KCNV1Q6PIU1 500 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 MAFAQ8NHW3 353 aaPredicted RBP17.72■□□□□ 0.43
VTI1A-203ENST00000472892 ESYT1Q9BSJ8 1104 aa17.72■□□□□ 0.43
VTI1A-203ENST00000472892 DDAH1O94760 285 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
VTI1A-203ENST00000472892 RFC2P35250 354 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 RAB30Q15771 203 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.71■□□□□ 0.43
VTI1A-203ENST00000472892 DHX37Q8IY37 1157 aaKnown RBP17.71■□□□□ 0.43
VTI1A-203ENST00000472892 ZNF654Q8IZM8 581 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 PPTC7Q8NI37 304 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 MSRAQ9UJ68 235 aa17.71■□□□□ 0.43
VTI1A-203ENST00000472892 UNC80Q8N2C7 3258 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 SLC27A2O14975 620 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 PRC1O43663 620 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 TGFB3P10600 412 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 HOXD8P13378 290 aaPredicted RBP17.7■□□□□ 0.42
VTI1A-203ENST00000472892 MCM5P33992 734 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 BFSP2Q13515 415 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 NECTIN1Q15223 517 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 PTGISQ16647 500 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 CASC1Q6TDU7 716 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 RETREG2Q8NC44 543 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 CTAGE1Q96RT6 745 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 SPZ1Q9BXG8 430 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 KIAA1217Q5T5P2 1943 aa17.7■□□□□ 0.42
VTI1A-203ENST00000472892 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 CCND2P30279 289 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 KIF5BP33176 963 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 LIFRP42702 1097 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 CHMP4BP1P59074 171 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 SP2Q02086 613 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 CELF3Q5SZQ8 465 aaKnown RBP17.69■□□□□ 0.42
VTI1A-203ENST00000472892 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
VTI1A-203ENST00000472892 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
VTI1A-203ENST00000472892 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 LZTS2Q9BRK4 669 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 NOD1Q9Y239 953 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 EYSQ5T1H1 3165 aa17.69■□□□□ 0.42
VTI1A-203ENST00000472892 HAS3O00219 553 aa17.68■□□□□ 0.42
VTI1A-203ENST00000472892 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
VTI1A-203ENST00000472892 COL9A3Q14050 684 aaPredicted RBP17.68■□□□□ 0.42
VTI1A-203ENST00000472892 BMP2KLQ5H9B9 411 aa17.68■□□□□ 0.42
VTI1A-203ENST00000472892 CREB3L3Q68CJ9 461 aa17.68■□□□□ 0.42
VTI1A-203ENST00000472892 POTEHQ6S545 545 aa17.68■□□□□ 0.42
VTI1A-203ENST00000472892 RRP36Q96EU6 259 aaKnown RBP17.68■□□□□ 0.42
VTI1A-203ENST00000472892 GTF2IRD1Q9UHL9 959 aa17.68■□□□□ 0.42
VTI1A-203ENST00000472892 YBX2Q9Y2T7 364 aaKnown RBP17.68■□□□□ 0.42
VTI1A-203ENST00000472892 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
VTI1A-203ENST00000472892 F2P00734 622 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 PSEN2P49810 448 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 GNAQP50148 359 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 MFSD10Q14728 455 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 HSDL1Q3SXM5 330 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
VTI1A-203ENST00000472892 C7orf31Q8N865 590 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms