RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 NECAB3Q96P71 396 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-208ENST00000470994 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 MIPEPQ99797 713 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 UTP14AQ9BVJ6 771 aaKnown RBP7.55□□□□□ -1.2
GPNMB-208ENST00000470994 RBCK1Q9BYM8 510 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 ABT1Q9ULW3 272 aaKnown RBP7.55□□□□□ -1.2
GPNMB-208ENST00000470994 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 SCN11AQ9UI33 1791 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 CARNS1A5YM72 827 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 FZD9O00144 591 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 PPIP5K2O43314 1243 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 SLITRK5O94991 958 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 CYP7A1P22680 504 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 LINC00310P59036 64 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 FGD1P98174 961 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 TTC6Q86TZ1 520 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 ZNF34Q8IZ26 560 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 KCNN1Q92952 543 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 PSMD1Q99460 953 aa7.54□□□□□ -1.2
GPNMB-208ENST00000470994 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
GPNMB-208ENST00000470994 PRR33A8MZF0 331 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 ETV2O00321 342 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-208ENST00000470994 FOXN1O15353 648 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 SRFP11831 508 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 EPS15P42566 896 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 DDX10Q13206 875 aaKnown RBP7.53□□□□□ -1.2
GPNMB-208ENST00000470994 PROSER3Q2NL68 480 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 DEFB115Q30KQ5 88 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 CRY2Q49AN0 593 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 PARP10Q53GL7 1025 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 COPS6Q7L5N1 327 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 CCDC146Q8IYE0 955 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 GPC2Q8N158 579 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 XAGE3Q8WTP9 111 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 MYLIPQ8WY64 445 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 CRAMP1Q96RY5 1269 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 PPM1HQ9ULR3 514 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 CAPN6Q9Y6Q1 641 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 ABCC12Q96J65 1359 aa7.53□□□□□ -1.2
GPNMB-208ENST00000470994 GOLGB1Q14789 3259 aaKnown RBP7.53□□□□□ -1.2
GPNMB-208ENST00000470994 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.2
GPNMB-208ENST00000470994 ADAMTS7Q9UKP4 1686 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 NTSR2O95665 410 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 GSTT1P30711 240 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 TMPOP42166 694 aaKnown RBP7.52□□□□□ -1.21
GPNMB-208ENST00000470994 KIR3DL1P43629 444 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 CTCFP49711 727 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-208ENST00000470994 LMOD3Q0VAK6 560 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 RALBP1Q15311 655 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 NXPE4Q6UWF7 544 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 GRIN3AQ8TCU5 1115 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 UBE2FQ969M7 185 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 BCL2L13Q9BXK5 485 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 TRMT112Q9UI30 125 aaKnown RBP7.52□□□□□ -1.21
GPNMB-208ENST00000470994 TMEM59LQ9UK28 342 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 ST14Q9Y5Y6 855 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 PASKQ96RG2 1323 aa7.52□□□□□ -1.21
GPNMB-208ENST00000470994 CNTNAP1P78357 1384 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 PRAMEF27A3QJZ7 478 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 BBOX1O75936 387 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 BMP6P22004 513 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 CAP2P40123 477 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 LBX1P52954 281 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 FMR1Q06787 632 aaKnown RBP eCLIP7.51□□□□□ -1.21
GPNMB-208ENST00000470994 WDR43Q15061 677 aaKnown RBP eCLIP7.51□□□□□ -1.21
GPNMB-208ENST00000470994 KRT24Q2M2I5 525 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 HSP90AB3PQ58FF7 597 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 DPP8Q6V1X1 898 aaPredicted RBP7.51□□□□□ -1.21
GPNMB-208ENST00000470994 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
GPNMB-208ENST00000470994 HDXQ7Z353 690 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 SUPT20HQ8NEM7 779 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 SRCIN1Q9C0H9 1055 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
GPNMB-208ENST00000470994 ZSWIM5Q9P217 1185 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 CYP8B1Q9UNU6 501 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 ATP6V0A2Q9Y487 856 aa7.51□□□□□ -1.21
GPNMB-208ENST00000470994 ARFGEF1Q9Y6D6 1849 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 TRAF5O00463 557 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 RAD17O75943 681 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 CBX7O95931 251 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 TCIRG1Q13488 830 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.5□□□□□ -1.21
GPNMB-208ENST00000470994 SLC10A5Q5PT55 438 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 NLRP10Q86W26 655 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 SP8Q8IXZ3 490 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 RELTQ969Z4 430 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 ZNF408Q9H9D4 720 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 ZNRF3Q9ULT6 936 aa7.5□□□□□ -1.21
GPNMB-208ENST00000470994 WDR33Q9C0J8 1336 aaKnown RBP7.5□□□□□ -1.21
GPNMB-208ENST00000470994 ENC1O14682 589 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 HOXA5P20719 270 aa7.49□□□□□ -1.21
GPNMB-208ENST00000470994 GMPSP49915 693 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-208ENST00000470994 MAP2K1Q02750 393 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-208ENST00000470994 CXCL9Q07325 125 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms