RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CNTD2Q9H8S5 307 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 ARHGEF4Q9NR80 690 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 FBLN5Q9UBX5 448 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 NPFFR2Q9Y5X5 522 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 ZC3H12DA2A288 527 aaKnown RBP6.23□□□□□ -1.41
COL9A1-206ENST00000470652 C22orf46C9J442 243 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 PRODHO43272 600 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 DLX3O60479 287 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 ZBTB7AO95365 584 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 PABPC1P11940 636 aaKnown RBP6.23□□□□□ -1.41
COL9A1-206ENST00000470652 PRR5P85299 388 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 IFRD2Q12894 506 aaPredicted RBP6.23□□□□□ -1.41
COL9A1-206ENST00000470652 SLC9A5Q14940 896 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 WWC2Q6AWC2 1192 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 DENND5AQ6IQ26 1287 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 NSMFQ6X4W1 530 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 RCBTB1Q8NDN9 531 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 DRC1Q96MC2 740 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 DEPDC7Q96QD5 511 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 BTG4Q9NY30 223 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 IRAK3Q9Y616 596 aa6.23□□□□□ -1.41
COL9A1-206ENST00000470652 CFTRP13569 1480 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 CADPSQ9ULU8 1353 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 NTRK1P04629 796 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 CDR1P51861 262 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 SSRP1Q08945 709 aaKnown RBP6.22□□□□□ -1.41
COL9A1-206ENST00000470652 LSAMPQ13449 338 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 RASA3Q14644 834 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 TARBP2Q15633 366 aaKnown RBP6.22□□□□□ -1.41
COL9A1-206ENST00000470652 MROH9Q5TGP6 573 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 RSPO2Q6UXX9 243 aaPredicted RBP6.22□□□□□ -1.41
COL9A1-206ENST00000470652 CEP68Q76N32 757 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 PMFBP1Q8TBY8 1022 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 TSPAN17Q96FV3 270 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 TMEM169Q96HH4 297 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 SIGLEC10Q96LC7 697 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 GPR27Q9NS67 375 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 CNOT6Q9ULM6 557 aaKnown RBP6.22□□□□□ -1.41
COL9A1-206ENST00000470652 PCDHA2Q9Y5H9 948 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 IRS2Q9Y4H2 1338 aa6.22□□□□□ -1.41
COL9A1-206ENST00000470652 FOXD2O60548 495 aaPredicted RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 BCL6P41182 706 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 EPHB3P54753 998 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 ZNF200P98182 395 aaPredicted RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 ZNF385BQ569K4 471 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 DPH6Q7L8W6 267 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 DCP2Q8IU60 420 aaKnown RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 RIOX2Q8IUF8 465 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 SCUBE1Q8IWY4 988 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 Q8N1Y9 231 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 DCAF4Q8WV16 495 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 OSBP2Q969R2 916 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 TRMT2BQ96GJ1 504 aaKnown RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 IPO9Q96P70 1041 aaKnown RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 SRPK1Q96SB4 655 aaKnown RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
COL9A1-206ENST00000470652 SNTG2Q9NY99 539 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 PFDN2Q9UHV9 154 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 JAG2Q9Y219 1238 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 PCDHA5Q9Y5H7 936 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 HCFC2Q9Y5Z7 792 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 X6R8D5 127 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 LAMC3Q9Y6N6 1575 aa6.21□□□□□ -1.42
COL9A1-206ENST00000470652 H7BY64 318 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 RFXAPO00287 272 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 ADCY3O60266 1144 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 LCP1P13796 627 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 PFKLP17858 780 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 LONRF2Q1L5Z9 754 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 YOD1Q5VVQ6 348 aaPredicted RBP6.2□□□□□ -1.42
COL9A1-206ENST00000470652 USP53Q70EK8 1073 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 IGDCC3Q8IVU1 814 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 CHAMP1Q96JM3 812 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 CDC6Q99741 560 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 RNF38Q9H0F5 515 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 AP5M1Q9H0R1 490 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 RXFP1Q9HBX9 757 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 COA3Q9Y2R0 106 aaPredicted RBP6.2□□□□□ -1.42
COL9A1-206ENST00000470652 KCTD3Q9Y597 815 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 ADAMTS20P59510 1910 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 FANCD2Q9BXW9 1451 aa6.2□□□□□ -1.42
COL9A1-206ENST00000470652 FAM221BA6H8Z2 402 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 IRS4O14654 1257 aaPredicted RBP6.19□□□□□ -1.42
COL9A1-206ENST00000470652 BUB1BO60566 1050 aaPredicted RBP6.19□□□□□ -1.42
COL9A1-206ENST00000470652 NCAM1P13591 858 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 FPR2P25090 351 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 SLC6A11P48066 632 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 NCKAP1LP55160 1127 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 ZC3H12BQ5HYM0 836 aaKnown RBP6.19□□□□□ -1.42
COL9A1-206ENST00000470652 NLRP10Q86W26 655 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 UBXN4Q92575 508 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 ALG3Q92685 438 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 ZFYVE21Q9BQ24 234 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 PHF20Q9BVI0 1012 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 OSBPL2Q9H1P3 480 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 KDM2BQ8NHM5 1336 aa6.19□□□□□ -1.42
COL9A1-206ENST00000470652 SYNJ1O43426 1573 aa6.18□□□□□ -1.42
COL9A1-206ENST00000470652 THOC2Q8NI27 1593 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms