RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 USP17L6PQ6QN14 398 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 ERO1AQ96HE7 468 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 PDS5AQ29RF7 1337 aaKnown RBP18.25■□□□□ 0.51
HOXB3-205ENST00000470495 DOT1LQ8TEK3 1739 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 A0A087X0B3 334 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
HOXB3-205ENST00000470495 SOWAHDA6NJG2 315 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 LAD1O00515 517 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 TBCAO75347 108 aaKnown RBP18.25■□□□□ 0.51
HOXB3-205ENST00000470495 TDP2O95551 362 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 PRCPP42785 496 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 NFIAQ12857 509 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
HOXB3-205ENST00000470495 SPDL1Q96EA4 605 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.25■□□□□ 0.51
HOXB3-205ENST00000470495 KANSL2Q9H9L4 492 aa18.25■□□□□ 0.51
HOXB3-205ENST00000470495 TPX2Q9ULW0 747 aaKnown RBP18.25■□□□□ 0.51
HOXB3-205ENST00000470495 H7C1D1 291 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 RGL2O15211 777 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 PFDN1O60925 122 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 NOP2P46087 812 aaKnown RBP18.24■□□□□ 0.51
HOXB3-205ENST00000470495 KRT31Q15323 416 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 E2F5Q15329 346 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 LRRC41Q15345 812 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 TRIM74Q86UV6 250 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 TRIM73Q86UV7 250 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 ADGRF4Q8IZF3 695 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 ARHGEF10LQ9HCE6 1279 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 PNMA6FA0A0J9YX94 578 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 TPP2P29144 1249 aaPredicted RBP18.24■□□□□ 0.51
HOXB3-205ENST00000470495 JDP2Q8WYK2 163 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 SPZ1Q9BXG8 430 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 COL1A1P02452 1464 aaPredicted RBP18.24■□□□□ 0.51
HOXB3-205ENST00000470495 PDHBP11177 359 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
HOXB3-205ENST00000470495 IL1R1P14778 569 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 CYP2C19P33261 490 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 ERCC6LQ2NKX8 1250 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 KLHL23Q8NBE8 558 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 TRIM11Q96F44 468 aa18.24■□□□□ 0.51
HOXB3-205ENST00000470495 IQCGQ9H095 443 aaKnown RBP18.24■□□□□ 0.51
HOXB3-205ENST00000470495 STX10O60499 249 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 GH2P01242 217 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 NCBP1Q09161 790 aaKnown RBP18.23■□□□□ 0.51
HOXB3-205ENST00000470495 DPYDQ12882 1025 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 YIPF3Q9GZM5 350 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 TYW1BQ6NUM6 668 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 FBXO11Q86XK2 927 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 FAM207AQ9NSI2 230 aaPredicted RBP18.23■□□□□ 0.51
HOXB3-205ENST00000470495 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 B4DLN1 442 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 SRGNP10124 158 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 ELF1P32519 619 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 CYLC1P35663 651 aaPredicted RBP18.23■□□□□ 0.51
HOXB3-205ENST00000470495 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 LARP4BQ92615 738 aaKnown RBP18.23■□□□□ 0.51
HOXB3-205ENST00000470495 AK8Q96MA6 479 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 RWDD2AQ9UIY3 292 aa18.23■□□□□ 0.51
HOXB3-205ENST00000470495 PALM3A6NDB9 673 aaPredicted RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CYTH3O43739 400 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 EN1Q05925 392 aaPredicted RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 FUT2Q10981 343 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CEP85LQ5SZL2 805 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 E4F1Q66K89 784 aaPredicted RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CYP26C1Q6V0L0 522 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CCDC65Q8IXS2 484 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CCDC42Q96M95 316 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CYP4A11Q02928 519 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 SEPT7Q16181 437 aaKnown RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 PDCD2Q16342 344 aaPredicted RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 KIAA1024Q9UPX6 916 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CTAGE9A4FU28 777 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 TUBB4AP04350 444 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 ACTN2P35609 894 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 UBXN2AP68543 259 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 KCTD17Q8N5Z5 321 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 HPS3Q969F9 1004 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 GJA10Q969M2 543 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 CD44P16070 742 aaKnown RBP18.22■□□□□ 0.51
HOXB3-205ENST00000470495 NT5C2P49902 561 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 ZBTB21Q9ULJ3 1066 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
HOXB3-205ENST00000470495 NUP98P52948 1817 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 JADE2Q9NQC1 790 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 HOXA13P31271 388 aaPredicted RBP18.21■□□□□ 0.51
HOXB3-205ENST00000470495 TOGARAM2Q6ZUX3 1019 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 TMTC1Q8IUR5 882 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 SEPT11Q9NVA2 429 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms