RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
HLA-C-206ENST00000470363 KRT23Q9C075 422 aa13.4□□□□□ -0.26
HLA-C-206ENST00000470363 CNNM2Q9H8M5 875 aa13.4□□□□□ -0.26
HLA-C-206ENST00000470363 CYP46A1Q9Y6A2 500 aa13.4□□□□□ -0.26
HLA-C-206ENST00000470363 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.27
HLA-C-206ENST00000470363 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
HLA-C-206ENST00000470363 KPNA6O60684 536 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 PPP1R11O60927 126 aaPredicted RBP13.39□□□□□ -0.27
HLA-C-206ENST00000470363 MYL3P08590 195 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
HLA-C-206ENST00000470363 SUPT20HL2P0C7V6 817 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 PSMA5P28066 241 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 HSD17B4P51659 736 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 USP38Q8NB14 1042 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 NCOA7Q8NI08 942 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
HLA-C-206ENST00000470363 KAT2BQ92831 832 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 SCLYQ96I15 445 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
HLA-C-206ENST00000470363 YBX2Q9Y2T7 364 aaKnown RBP13.39□□□□□ -0.27
HLA-C-206ENST00000470363 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 PTPN11Q06124 597 aaPredicted RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 ADGRE1Q14246 886 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 TTLL4Q14679 1199 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 GPNMBQ14956 572 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 MCF2L2Q86YR7 1114 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 PPP1R13LQ8WUF5 828 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 SENP2Q9HC62 589 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 PDRG1Q9NUG6 133 aa13.38□□□□□ -0.27
HLA-C-206ENST00000470363 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
HLA-C-206ENST00000470363 B4DLN1 442 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 RGS20O76081 388 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
HLA-C-206ENST00000470363 ANTXR2P58335 489 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 EXOSC10Q01780 885 aaKnown RBP13.37□□□□□ -0.27
HLA-C-206ENST00000470363 TRDNQ13061 729 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 STXBP2Q15833 593 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
HLA-C-206ENST00000470363 DHX32Q7L7V1 743 aaKnown RBP13.37□□□□□ -0.27
HLA-C-206ENST00000470363 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
HLA-C-206ENST00000470363 SESTD1Q86VW0 696 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 AFG1LQ8WV93 481 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
HLA-C-206ENST00000470363 RMDN3Q96TC7 470 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
HLA-C-206ENST00000470363 TRANK1O15050 2925 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 ZBTB5O15062 677 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 CYTH3O43739 400 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 ST18O60284 1047 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
HLA-C-206ENST00000470363 NR3C2P08235 984 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 PFKMP08237 780 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 MMP3P08254 477 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 IQCF3P0C7M6 154 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
HLA-C-206ENST00000470363 AK2P54819 239 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 TROAPQ12815 778 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 RAB30Q15771 203 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
HLA-C-206ENST00000470363 SEPT14Q6ZU15 432 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 Q6ZUG5 572 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 PRDM12Q9H4Q4 367 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 PXMP2Q9NR77 195 aa13.36□□□□□ -0.27
HLA-C-206ENST00000470363 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
HLA-C-206ENST00000470363 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 PRC1O43663 620 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 GH1P01241 217 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 MYOGP15173 224 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 MCM5P33992 734 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 RABGGTBP53611 331 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 GRM4Q14833 912 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 VSIG10LQ86VR7 867 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 SNX21Q969T3 373 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 PDCD2LQ9BRP1 358 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 MTIF3Q9H2K0 278 aaKnown RBP13.35□□□□□ -0.27
HLA-C-206ENST00000470363 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
HLA-C-206ENST00000470363 HAS3O00219 553 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 CFBP00751 764 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms