RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 OTOP2Q7RTS6 562 aa36.33■■■■□ 3.41
HMG20B-209ENST00000470356 EMID1Q96A84 441 aaPredicted RBP36.33■■■■□ 3.41
HMG20B-209ENST00000470356 VWCEQ96DN2 955 aa36.33■■■■□ 3.41
HMG20B-209ENST00000470356 SCLYQ96I15 445 aa36.33■■■■□ 3.41
HMG20B-209ENST00000470356 PDCD2LQ9BRP1 358 aa36.33■■■■□ 3.41
HMG20B-209ENST00000470356 UNC80Q8N2C7 3258 aa36.33■■■■□ 3.41
HMG20B-209ENST00000470356 HOXA13P31271 388 aaPredicted RBP36.32■■■■□ 3.4
HMG20B-209ENST00000470356 PBX2P40425 430 aa36.32■■■■□ 3.4
HMG20B-209ENST00000470356 GRIN2CQ14957 1233 aa36.32■■■■□ 3.4
HMG20B-209ENST00000470356 MAFAQ8NHW3 353 aaPredicted RBP36.32■■■■□ 3.4
HMG20B-209ENST00000470356 PPP1R13LQ8WUF5 828 aa36.32■■■■□ 3.4
HMG20B-209ENST00000470356 FOSL2P15408 326 aa36.31■■■■□ 3.4
HMG20B-209ENST00000470356 CASTP20810 708 aaKnown RBP36.31■■■■□ 3.4
HMG20B-209ENST00000470356 MTA3Q9BTC8 594 aa36.31■■■■□ 3.4
HMG20B-209ENST00000470356 MRVI1Q9Y6F6 885 aa36.31■■■■□ 3.4
HMG20B-209ENST00000470356 TRIP12Q14669 1992 aaPredicted RBP36.3■■■■□ 3.4
HMG20B-209ENST00000470356 PFKMP08237 780 aa36.3■■■■□ 3.4
HMG20B-209ENST00000470356 VSIG10LQ86VR7 867 aa36.3■■■■□ 3.4
HMG20B-209ENST00000470356 PHF6Q8IWS0 365 aaKnown RBP eCLIP36.3■■■■□ 3.4
HMG20B-209ENST00000470356 MAP3K14Q99558 947 aa36.3■■■■□ 3.4
HMG20B-209ENST00000470356 LSG1Q9H089 658 aaKnown RBP36.3■■■■□ 3.4
HMG20B-209ENST00000470356 SCN5AQ14524 2016 aa36.3■■■■□ 3.4
HMG20B-209ENST00000470356 GCOM1H8Y6P7 765 aaPredicted RBP36.29■■■■□ 3.4
HMG20B-209ENST00000470356 POLR2MP0CAP2 368 aa36.29■■■■□ 3.4
HMG20B-209ENST00000470356 MYCLP12524 364 aaPredicted RBP36.29■■■■□ 3.4
HMG20B-209ENST00000470356 LAMC2Q13753 1193 aa36.29■■■■□ 3.4
HMG20B-209ENST00000470356 DGKDQ16760 1214 aa36.29■■■■□ 3.4
HMG20B-209ENST00000470356 KAT2BQ92831 832 aa36.29■■■■□ 3.4
HMG20B-209ENST00000470356 LY9Q9HBG7 655 aa36.29■■■■□ 3.4
HMG20B-209ENST00000470356 PITPNM1O00562 1244 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 RGS20O76081 388 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 CHMP4BP1P59074 171 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 PGM5Q15124 567 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 RAB30Q15771 203 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 KCNV1Q6PIU1 500 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 SESTD1Q86VW0 696 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 ESYT1Q9BSJ8 1104 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 MSRAQ9UJ68 235 aa36.28■■■■□ 3.4
HMG20B-209ENST00000470356 GBF1Q92538 1859 aa36.27■■■■□ 3.4
HMG20B-209ENST00000470356 NOD1Q9Y239 953 aa36.27■■■■□ 3.4
HMG20B-209ENST00000470356 CHD9Q3L8U1 2897 aa36.27■■■■□ 3.4
HMG20B-209ENST00000470356 EYSQ5T1H1 3165 aa36.27■■■■□ 3.4
HMG20B-209ENST00000470356 RFC2P35250 354 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 BFSP2Q13515 415 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 CASC1Q6TDU7 716 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 DHX37Q8IY37 1157 aaKnown RBP36.26■■■■□ 3.4
HMG20B-209ENST00000470356 ZNF654Q8IZM8 581 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 RETREG2Q8NC44 543 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 PPTC7Q8NI37 304 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 SLC4A7Q9Y6M7 1214 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 PRUNE2Q8WUY3 3088 aa36.26■■■■□ 3.4
HMG20B-209ENST00000470356 PRC1O43663 620 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 DDAH1O94760 285 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 MCM5P33992 734 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 PTGISQ16647 500 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 FCHSD1Q86WN1 690 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 IL31RAQ8NI17 732 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 CTCFLQ8NI51 663 aaPredicted RBP36.25■■■■□ 3.39
HMG20B-209ENST00000470356 SPZ1Q9BXG8 430 aa36.25■■■■□ 3.39
HMG20B-209ENST00000470356 IQCF3P0C7M6 154 aa36.24■■■■□ 3.39
HMG20B-209ENST00000470356 TGFB3P10600 412 aa36.24■■■■□ 3.39
HMG20B-209ENST00000470356 SMARCA1P28370 1054 aa36.24■■■■□ 3.39
HMG20B-209ENST00000470356 KIF5BP33176 963 aa36.24■■■■□ 3.39
HMG20B-209ENST00000470356 DEFB128Q7Z7B8 93 aa36.24■■■■□ 3.39
HMG20B-209ENST00000470356 TMTC2Q8N394 836 aa36.24■■■■□ 3.39
HMG20B-209ENST00000470356 TET1Q8NFU7 2136 aa36.23■■■■□ 3.39
HMG20B-209ENST00000470356 CCND2P30279 289 aa36.23■■■■□ 3.39
HMG20B-209ENST00000470356 MYSM1Q5VVJ2 828 aa36.23■■■■□ 3.39
HMG20B-209ENST00000470356 TMEM87BQ96K49 555 aa36.23■■■■□ 3.39
HMG20B-209ENST00000470356 TANC1Q9C0D5 1861 aa36.22■■■■□ 3.39
HMG20B-209ENST00000470356 SLC27A2O14975 620 aa36.22■■■■□ 3.39
HMG20B-209ENST00000470356 CELF3Q5SZQ8 465 aaKnown RBP36.22■■■■□ 3.39
HMG20B-209ENST00000470356 GDF6Q6KF10 455 aaPredicted RBP36.22■■■■□ 3.39
HMG20B-209ENST00000470356 PIBF1Q8WXW3 757 aa36.22■■■■□ 3.39
HMG20B-209ENST00000470356 CTAGE1Q96RT6 745 aa36.22■■■■□ 3.39
HMG20B-209ENST00000470356 LZTS2Q9BRK4 669 aa36.22■■■■□ 3.39
HMG20B-209ENST00000470356 MYL10Q9BUA6 226 aa36.22■■■■□ 3.39
HMG20B-209ENST00000470356 ZBBXA8MT70 800 aa36.21■■■■□ 3.39
HMG20B-209ENST00000470356 PPFIA4O75335 1185 aa36.21■■■■□ 3.39
HMG20B-209ENST00000470356 HOXD8P13378 290 aaPredicted RBP36.21■■■■□ 3.39
HMG20B-209ENST00000470356 NECTIN1Q15223 517 aa36.21■■■■□ 3.39
HMG20B-209ENST00000470356 RRP36Q96EU6 259 aaKnown RBP36.21■■■■□ 3.39
HMG20B-209ENST00000470356 KATNAL1Q9BW62 490 aa36.21■■■■□ 3.39
HMG20B-209ENST00000470356 SH2B2O14492 632 aaPredicted RBP36.2■■■■□ 3.39
HMG20B-209ENST00000470356 PSEN2P49810 448 aa36.2■■■■□ 3.39
HMG20B-209ENST00000470356 CREB3L3Q68CJ9 461 aa36.2■■■■□ 3.39
HMG20B-209ENST00000470356 CCDC155Q8N6L0 562 aa36.2■■■■□ 3.39
HMG20B-209ENST00000470356 CAGE1Q8TC20 777 aa36.2■■■■□ 3.39
HMG20B-209ENST00000470356 GTF2IRD1Q9UHL9 959 aa36.2■■■■□ 3.39
HMG20B-209ENST00000470356 HAS3O00219 553 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 F2P00734 622 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 ACTN1P12814 892 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 LIFRP42702 1097 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 GNAQP50148 359 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 BMP2KLQ5H9B9 411 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 NFXL1Q6ZNB6 911 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 C7orf31Q8N865 590 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 NKX2-4Q9H2Z4 354 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 ANO2Q9NQ90 1003 aa36.19■■■■□ 3.38
HMG20B-209ENST00000470356 YBX2Q9Y2T7 364 aaKnown RBP36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms