RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 CHAMP1Q96JM3 812 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 IPO9Q96P70 1041 aaKnown RBP8.13□□□□□ -1.11
XRN1-207ENST00000468894 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
XRN1-207ENST00000468894 C1QTNF9P0C862 333 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 ZNF124Q15973 351 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 TMEM132EQ6IEE7 984 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 MAMDC2Q7Z304 686 aaPredicted RBP8.12□□□□□ -1.11
XRN1-207ENST00000468894 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.11
XRN1-207ENST00000468894 PTPRN2Q92932 1015 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 TSPAN17Q96FV3 270 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 PEX11GQ96HA9 241 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 BCAS3Q9H6U6 928 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 DBR1Q9UK59 544 aaKnown RBP8.12□□□□□ -1.11
XRN1-207ENST00000468894 NUDT5Q9UKK9 219 aa8.12□□□□□ -1.11
XRN1-207ENST00000468894 GRK2P25098 689 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 GRK3P35626 688 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 SLC6A11P48066 632 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 KIZQ2M2Z5 673 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 LDHDQ86WU2 507 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 IFNL3Q8IZI9 196 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 KCNN1Q92952 543 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 CD320Q9NPF0 282 aa8.11□□□□□ -1.11
XRN1-207ENST00000468894 COA3Q9Y2R0 106 aaPredicted RBP8.11□□□□□ -1.11
XRN1-207ENST00000468894 SGSM2O43147 1006 aa8.1□□□□□ -1.11
XRN1-207ENST00000468894 TMEM253P0C7T8 217 aa8.1□□□□□ -1.11
XRN1-207ENST00000468894 GABREP78334 506 aa8.1□□□□□ -1.11
XRN1-207ENST00000468894 ATG14Q6ZNE5 492 aa8.1□□□□□ -1.11
XRN1-207ENST00000468894 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
XRN1-207ENST00000468894 PCDHA5Q9Y5H7 936 aa8.1□□□□□ -1.11
XRN1-207ENST00000468894 IRS2Q9Y4H2 1338 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 NFIBO00712 420 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 AQP7O14520 342 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 N4BP3O15049 544 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 NCKAP1LP55160 1127 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 PKN1Q16512 942 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 TRIM61Q5EBN2 209 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 JAZF1Q86VZ6 243 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 IGDCC3Q8IVU1 814 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.11
XRN1-207ENST00000468894 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 JAM3Q9BX67 310 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 AP5M1Q9H0R1 490 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 EPB41L1Q9H4G0 881 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 SLC52A2Q9HAB3 445 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 TMEM260Q9NX78 707 aa8.09□□□□□ -1.11
XRN1-207ENST00000468894 TCAF2A6NFQ2 919 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 IRS4O14654 1257 aaPredicted RBP8.08□□□□□ -1.12
XRN1-207ENST00000468894 PMLP29590 882 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 SLC9A5Q14940 896 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 EMC4Q5J8M3 183 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 GSTCDQ8NEC7 633 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
XRN1-207ENST00000468894 ALG3Q92685 438 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 NCOA5Q9HCD5 579 aaKnown RBP8.08□□□□□ -1.12
XRN1-207ENST00000468894 NDOR1Q9UHB4 597 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 PALD1Q9ULE6 856 aa8.08□□□□□ -1.12
XRN1-207ENST00000468894 CCDC163A0A0D9SF12 145 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 SOD2P04179 222 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 ASGR2P07307 311 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 RAP1GAPP47736 663 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 MTDHQ86UE4 582 aaKnown RBP8.07□□□□□ -1.12
XRN1-207ENST00000468894 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 SLC7A14Q8TBB6 771 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 MRPL4Q9BYD3 311 aaKnown RBP8.07□□□□□ -1.12
XRN1-207ENST00000468894 IPPKQ9H8X2 491 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 SFMBT1Q9UHJ3 866 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 ZNF652Q9Y2D9 606 aa8.07□□□□□ -1.12
XRN1-207ENST00000468894 ESYT3A0FGR9 886 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 ARVCFO00192 962 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 IGSF3O75054 1194 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 DGKIO75912 1065 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 ZBTB7AO95365 584 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 IGFBP6P24592 240 aaPredicted RBP8.06□□□□□ -1.12
XRN1-207ENST00000468894 MC3RP41968 323 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 SSPNQ14714 243 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 STEAP3Q658P3 488 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 GOLGA2P5Q9HBQ8 144 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 SMG5Q9UPR3 1016 aaKnown RBP8.06□□□□□ -1.12
XRN1-207ENST00000468894 PCDHA8Q9Y5H6 950 aa8.06□□□□□ -1.12
XRN1-207ENST00000468894 MRPL42Q9Y6G3 142 aaKnown RBP8.06□□□□□ -1.12
XRN1-207ENST00000468894 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.05□□□□□ -1.12
XRN1-207ENST00000468894 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
XRN1-207ENST00000468894 CRTAMO95727 393 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 ATF2P15336 505 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 LINC00310P59036 64 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 CHRNA2Q15822 529 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 KCNA10Q16322 511 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 BRAPQ7Z569 592 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 PIP4K2CQ8TBX8 421 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 SIGLEC10Q96LC7 697 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 KCNJ15Q99712 375 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 RNF38Q9H0F5 515 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 PCDHA9Q9Y5H5 950 aa8.05□□□□□ -1.12
XRN1-207ENST00000468894 FAM47E-STBD1D6RA91 191 aa8.04□□□□□ -1.12
XRN1-207ENST00000468894 NPIPB6E9PJ23 425 aa8.04□□□□□ -1.12
XRN1-207ENST00000468894 WNT9AO14904 365 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms