RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ITGA1P56199 1179 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 PAK2Q13177 524 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 CIR1Q86X95 450 aaPredicted RBP5.9□□□□□ -1.46
SSB-208ENST00000468600 MIB1Q86YT6 1006 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 PALM2Q8IXS6 379 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 RCC1LQ96I51 464 aaKnown RBP5.9□□□□□ -1.46
SSB-208ENST00000468600 PPP4R1LQ9P1A2 415 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 ING1Q9UK53 422 aaPredicted RBP5.9□□□□□ -1.46
SSB-208ENST00000468600 TCAF1Q9Y4C2 921 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 B4GALT3O60512 393 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 PPP1R11O60927 126 aaPredicted RBP5.89□□□□□ -1.47
SSB-208ENST00000468600 VAMP4O75379 141 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 RECKO95980 971 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 CYP1A1P04798 512 aaPredicted RBP5.89□□□□□ -1.47
SSB-208ENST00000468600 EIF6P56537 245 aaKnown RBP5.89□□□□□ -1.47
SSB-208ENST00000468600 GRB10Q13322 594 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 GNPTABQ3T906 1256 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 PRR31Q5SQ13 230 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 PRAMEF18Q5VWM3 479 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 HEATR6Q6AI08 1181 aaKnown RBP5.89□□□□□ -1.47
SSB-208ENST00000468600 STK32CQ86UX6 486 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 METTL16Q86W50 562 aaKnown RBP5.89□□□□□ -1.47
SSB-208ENST00000468600 ARHGEF39Q8N4T4 335 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 SYT3Q9BQG1 590 aa5.89□□□□□ -1.47
SSB-208ENST00000468600 NGRNQ9NPE2 291 aaKnown RBP5.89□□□□□ -1.47
SSB-208ENST00000468600 A0A1W2PQH9 124 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 C7orf72A4D263 438 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 PPM1BO75688 479 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 AMHP03971 560 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 SELENOPP49908 381 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 SLC7A5Q01650 507 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 ADAT2Q7Z6V5 191 aaKnown RBP5.88□□□□□ -1.47
SSB-208ENST00000468600 FAM26EQ8N5C1 309 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 SEC14L1Q92503 715 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 YIPF4Q9BSR8 244 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 MARCH2Q9P0N8 246 aa5.88□□□□□ -1.47
SSB-208ENST00000468600 EPHX1P07099 455 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 GJA8P48165 433 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 CASP7P55210 303 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 ZNF585AQ6P3V2 769 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 CCDC81Q6ZN84 652 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 KLHL6Q8WZ60 621 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 SEMA4AQ9H3S1 761 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 L2HGDHQ9H9P8 463 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 CD248Q9HCU0 757 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 JADE2Q9NQC1 790 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 CGGBP1Q9UFW8 167 aaPredicted RBP5.87□□□□□ -1.47
SSB-208ENST00000468600 EFR3BQ9Y2G0 817 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 HS3ST3A1Q9Y663 406 aa5.87□□□□□ -1.47
SSB-208ENST00000468600 MUSKO15146 869 aa5.86□□□□□ -1.47
SSB-208ENST00000468600 ZNF28P17035 718 aa5.86□□□□□ -1.47
SSB-208ENST00000468600 HNRNPA0Q13151 305 aaKnown RBP5.86□□□□□ -1.47
SSB-208ENST00000468600 ARHGEF18Q6ZSZ5 1173 aa5.86□□□□□ -1.47
SSB-208ENST00000468600 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
SSB-208ENST00000468600 GPR42O15529 346 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 SGSM2O43147 1006 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 SLC6A11P48066 632 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 NKX3-2P78367 333 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 ZNF513Q8N8E2 541 aaPredicted RBP5.85□□□□□ -1.47
SSB-208ENST00000468600 DNERQ8NFT8 737 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 PLEKHO2Q8TD55 490 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 IGDCC4Q8TDY8 1250 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 FGD4Q96M96 766 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 TMEM168Q9H0V1 697 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 PCDHB10Q9UN67 800 aa5.85□□□□□ -1.47
SSB-208ENST00000468600 ZBTB7CA1YPR0 619 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 ANKRD34BA5PLL1 514 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 CYP7B1O75881 506 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 THBDP07204 575 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 STAT5AP42229 794 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 EPHB4P54760 987 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 MFAP1P55081 439 aaKnown RBP5.84□□□□□ -1.47
SSB-208ENST00000468600 PPP2CBP62714 309 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 PPP2CAP67775 309 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 MILR1Q7Z6M3 343 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 TEX2Q8IWB9 1127 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 SHDQ96IW2 340 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 BTG4Q9NY30 223 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 CLEC1BQ9P126 229 aa5.84□□□□□ -1.47
SSB-208ENST00000468600 ZNF143P52747 638 aaPredicted RBP5.83□□□□□ -1.48
SSB-208ENST00000468600 ADAM9Q13443 819 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 COPS5Q92905 334 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 SEC16BQ96JE7 1060 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 CLIC6Q96NY7 704 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 WRNIP1Q96S55 665 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 MMP19Q99542 508 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 ZNF341Q9BYN7 854 aa5.83□□□□□ -1.48
SSB-208ENST00000468600 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.83□□□□□ -1.48
SSB-208ENST00000468600 C22orf46C9J442 243 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 IL13P35225 146 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 SPDYAQ5MJ70 313 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 MROH9Q5TGP6 573 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 SLFN13Q68D06 897 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 ZNF575Q86XF7 245 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 KBTBD2Q8IY47 623 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 CRACR2BQ8N4Y2 399 aaPredicted RBP5.82□□□□□ -1.48
SSB-208ENST00000468600 MBD6Q96DN6 1003 aa5.82□□□□□ -1.48
SSB-208ENST00000468600 ZSWIM3Q96MP5 696 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms