RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PITPNM1O00562 1244 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 OPLAHO14841 1288 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 IQCF3P0C7M6 154 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 ACTN1P12814 892 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 RFC2P35250 354 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 TRDNQ13061 729 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 PCDHA11Q9Y5I1 949 aa24.51■■□□□ 1.51
COL9A3-207ENST00000467819 PPP1R11O60927 126 aaPredicted RBP24.5■■□□□ 1.51
COL9A3-207ENST00000467819 NR3C2P08235 984 aa24.5■■□□□ 1.51
COL9A3-207ENST00000467819 HSD17B4P51659 736 aa24.5■■□□□ 1.51
COL9A3-207ENST00000467819 BFSP2Q13515 415 aa24.5■■□□□ 1.51
COL9A3-207ENST00000467819 CCDC85BQ15834 202 aaPredicted RBP24.5■■□□□ 1.51
COL9A3-207ENST00000467819 PTGISQ16647 500 aa24.5■■□□□ 1.51
COL9A3-207ENST00000467819 HOMER1Q86YM7 354 aa24.5■■□□□ 1.51
COL9A3-207ENST00000467819 FTOQ9C0B1 505 aaKnown RBP eCLIP24.5■■□□□ 1.51
COL9A3-207ENST00000467819 MRVI1Q9Y6F6 885 aa24.5■■□□□ 1.51
COL9A3-207ENST00000467819 ZBTB5O15062 677 aa24.49■■□□□ 1.51
COL9A3-207ENST00000467819 EIF3JO75822 258 aaKnown RBP24.49■■□□□ 1.51
COL9A3-207ENST00000467819 CASTP20810 708 aaKnown RBP24.49■■□□□ 1.51
COL9A3-207ENST00000467819 PTH1RQ03431 593 aa24.49■■□□□ 1.51
COL9A3-207ENST00000467819 GDF6Q6KF10 455 aaPredicted RBP24.49■■□□□ 1.51
COL9A3-207ENST00000467819 RUFY2Q8WXA3 655 aa24.49■■□□□ 1.51
COL9A3-207ENST00000467819 SYMPKQ92797 1274 aaKnown RBP24.49■■□□□ 1.51
COL9A3-207ENST00000467819 KAT2BQ92831 832 aa24.49■■□□□ 1.51
COL9A3-207ENST00000467819 MTMR8Q96EF0 704 aa24.49■■□□□ 1.51
COL9A3-207ENST00000467819 DDX41Q9UJV9 622 aaKnown RBP24.49■■□□□ 1.51
COL9A3-207ENST00000467819 PCDHA1Q9Y5I3 950 aa24.49■■□□□ 1.51
COL9A3-207ENST00000467819 PALM3A6NDB9 673 aaPredicted RBP24.48■■□□□ 1.51
COL9A3-207ENST00000467819 CYP21A2P08686 494 aa24.48■■□□□ 1.51
COL9A3-207ENST00000467819 MYCLP12524 364 aaPredicted RBP24.48■■□□□ 1.51
COL9A3-207ENST00000467819 DGKDQ16760 1214 aa24.48■■□□□ 1.51
COL9A3-207ENST00000467819 U3KPZ7 1027 aaPredicted RBP24.48■■□□□ 1.51
COL9A3-207ENST00000467819 IFIT3O14879 490 aaKnown RBP24.47■■□□□ 1.51
COL9A3-207ENST00000467819 CHMLP26374 656 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 HOXA13P31271 388 aaPredicted RBP24.47■■□□□ 1.51
COL9A3-207ENST00000467819 TMEM67Q5HYA8 995 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 TJAP1Q5JTD0 557 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 CCDC155Q8N6L0 562 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 PDCD2LQ9BRP1 358 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 ALG1Q9BT22 464 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 SENP2Q9HC62 589 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 TAF6LQ9Y6J9 622 aa24.47■■□□□ 1.51
COL9A3-207ENST00000467819 ERICH2A1L162 156 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 SORBS3O60504 671 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 ZNF286BP0CG31 522 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 IRX6P78412 446 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-207ENST00000467819 GHRHRQ02643 423 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 GRM4Q14833 912 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 SLC35G1Q2M3R5 365 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 RALYLQ86SE5 291 aaKnown RBP24.46■■□□□ 1.51
COL9A3-207ENST00000467819 SESTD1Q86VW0 696 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 DHX37Q8IY37 1157 aaKnown RBP24.46■■□□□ 1.51
COL9A3-207ENST00000467819 CTAGE1Q96RT6 745 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 PIGSQ96S52 555 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 SLC9A7Q96T83 725 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 DOCK5Q9H7D0 1870 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 TRANK1O15050 2925 aa24.46■■□□□ 1.51
COL9A3-207ENST00000467819 CA3P07451 260 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 PSEN2P49810 448 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 LAMC2Q13753 1193 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 MICALL1Q8N3F8 863 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 IL31RAQ8NI17 732 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 CAGE1Q8TC20 777 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 AFAP1L1Q8TED9 768 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 EMID1Q96A84 441 aaPredicted RBP24.45■■□□□ 1.5
COL9A3-207ENST00000467819 THEGQ9P2T0 379 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 HDAC6Q9UBN7 1215 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 REV3LO60673 3130 aa24.45■■□□□ 1.5
COL9A3-207ENST00000467819 RGS20O76081 388 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 WTAPQ15007 396 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 PGM5Q15124 567 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 STOX1Q6ZVD7 989 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 C7orf31Q8N865 590 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 PPTC7Q8NI37 304 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 DHX38Q92620 1227 aaKnown RBP24.44■■□□□ 1.5
COL9A3-207ENST00000467819 ZFP91Q96JP5 570 aaPredicted RBP24.44■■□□□ 1.5
COL9A3-207ENST00000467819 KATNAL1Q9BW62 490 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 MAP3K20Q9NYL2 800 aaKnown RBP24.44■■□□□ 1.5
COL9A3-207ENST00000467819 GTF2IRD1Q9UHL9 959 aa24.44■■□□□ 1.5
COL9A3-207ENST00000467819 PRRC2BQ5JSZ5 2229 aaKnown RBP24.44■■□□□ 1.5
COL9A3-207ENST00000467819 E7EWF7 191 aa24.43■■□□□ 1.5
COL9A3-207ENST00000467819 MFSD10Q14728 455 aa24.43■■□□□ 1.5
COL9A3-207ENST00000467819 FCHSD1Q86WN1 690 aa24.43■■□□□ 1.5
COL9A3-207ENST00000467819 NCOA7Q8NI08 942 aa24.43■■□□□ 1.5
COL9A3-207ENST00000467819 RIOX1Q9H6W3 641 aa24.43■■□□□ 1.5
COL9A3-207ENST00000467819 CERS4Q9HA82 394 aa24.43■■□□□ 1.5
COL9A3-207ENST00000467819 GCOM1H8Y6P7 765 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-207ENST00000467819 CYTH3O43739 400 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 F2P00734 622 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 POLR2MP0CAP2 368 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 SELPP16109 830 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 SART3Q15020 963 aaKnown RBP24.42■■□□□ 1.5
COL9A3-207ENST00000467819 KIAA0753Q2KHM9 967 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 LRRC8DQ7L1W4 858 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 VSIG10LQ86VR7 867 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 HERC6Q8IVU3 1022 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 SAMD3Q8N6K7 520 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 PHOSPHO2Q8TCD6 241 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 PIBF1Q8WXW3 757 aa24.42■■□□□ 1.5
COL9A3-207ENST00000467819 MUC3AQ02505 3323 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms