RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CHMP4BP1P59074 171 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 TMEM67Q5HYA8 995 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 PDCD2LQ9BRP1 358 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 TMEM265A0A087WTH1 108 aa17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 SORBS3O60504 671 aa17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 EIF3JO75822 258 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 GH1P01241 217 aa17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 BRDTQ58F21 947 aaPredicted RBP17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 NFRKBQ6P4R8 1299 aa17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 MAFAQ8NHW3 353 aaPredicted RBP17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 LY9Q9HBG7 655 aa17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 YBX2Q9Y2T7 364 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 TTC28Q96AY4 2481 aa17.15■□□□□ 0.34
ATPAF2-204ENST00000467560 KPNA6O60684 536 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 SUPT20HL2P0C7V6 817 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 MYCLP12524 364 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 FOSL2P15408 326 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 SP2Q02086 613 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 DEFB128Q7Z7B8 93 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 VSIG10LQ86VR7 867 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
ATPAF2-204ENST00000467560 PNMA6FA0A0J9YX94 578 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 ERICH2A1L162 156 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 RABGGTBP53611 331 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 PGM5Q15124 567 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 GDF6Q6KF10 455 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 CATIPQ7Z7H3 387 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 USP38Q8NB14 1042 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 SCN5AQ14524 2016 aa17.13■□□□□ 0.33
ATPAF2-204ENST00000467560 KIAA1217Q5T5P2 1943 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 SLC27A2O14975 620 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 PRC1O43663 620 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 MYOGP15173 224 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 SART3Q15020 963 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 DHX38Q92620 1227 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 NKX2-4Q9H2Z4 354 aa17.12■□□□□ 0.33
ATPAF2-204ENST00000467560 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 PLEKHA8P1O95397 391 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 IQCF3P0C7M6 154 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 RXRAP19793 462 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 HIC1Q14526 733 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 GPNMBQ14956 572 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 PTGISQ16647 500 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 RAB11FIP4Q86YS3 637 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 PRDM12Q9H4Q4 367 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 TELO2Q9Y4R8 837 aa17.11■□□□□ 0.33
ATPAF2-204ENST00000467560 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 PSEN2P49810 448 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 MRPS9P82933 396 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 LAMC2Q13753 1193 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 ADGRE1Q14246 886 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 CREB3L3Q68CJ9 461 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 DHX37Q8IY37 1157 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 WNT8BQ93098 351 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 COL25A1Q9BXS0 654 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 HDAC6Q9UBN7 1215 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 SLC4A7Q9Y6M7 1214 aa17.1■□□□□ 0.33
ATPAF2-204ENST00000467560 TRANK1O15050 2925 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 ZBBXA8MT70 800 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 HAS3O00219 553 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 GGPS1O95749 300 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 F2P00734 622 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 ZNF200P98182 395 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 DGKDQ16760 1214 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 NOD1Q9Y239 953 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 TET1Q8NFU7 2136 aa17.09■□□□□ 0.33
ATPAF2-204ENST00000467560 MYO9BQ13459 2157 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms