RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 MBD4O95243 580 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 CKBP12277 381 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 MTHFRP42898 656 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 PSEN2P49810 448 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 ARHGAP8P85298 464 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 PUM1Q14671 1186 aaKnown RBP eCLIP6.71□□□□□ -1.34
CXXC4-202ENST00000466963 PTPN21Q16825 1174 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 EPC2Q52LR7 807 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 KIAA1755Q5JYT7 1200 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 CCDC62Q6P9F0 684 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 RHPN1Q8TCX5 695 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 MSLNLQ96KJ4 702 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 CCPG1Q9ULG6 757 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 MMP3P08254 477 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 TSPY3P0CV98 308 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 TSPY8P0CW00 308 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 RABGGTBP53611 331 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 TFF2Q03403 129 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 ITIH3Q06033 890 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 PI16Q6UXB8 463 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 RNF135Q8IUD6 432 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 GPR65Q8IYL9 337 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 LCORLQ8N3X6 602 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 NME8Q8N427 588 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 ANKS1AQ92625 1134 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 CDHR1Q96JP9 859 aa6.71□□□□□ -1.34
CXXC4-202ENST00000466963 STRBPQ96SI9 672 aaKnown RBP6.71□□□□□ -1.34
CXXC4-202ENST00000466963 RNF41Q9H4P4 317 aaPredicted RBP6.71□□□□□ -1.34
CXXC4-202ENST00000466963 RAVER2Q9HCJ3 691 aaKnown RBP6.71□□□□□ -1.34
CXXC4-202ENST00000466963 ZNF215Q9UL58 517 aaPredicted RBP6.71□□□□□ -1.34
CXXC4-202ENST00000466963 KIAA1217Q5T5P2 1943 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 PNMA6EA0A0J9YXQ4 647 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 TRIM27P14373 513 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 KCNA5P22460 613 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 SYDE2Q5VT97 1194 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 RSPO2Q6UXX9 243 aaPredicted RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 RNF207Q6ZRF8 634 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 KBTBD3Q8NAB2 608 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 PRSS33Q8NF86 280 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 PBXIP1Q96AQ6 731 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 ZNF316A6NFI3 1004 aaPredicted RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 PPM1AP35813 382 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 SUSD6Q92537 303 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 KIFC2Q96AC6 838 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 NGRNQ9NPE2 291 aaKnown RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 CLIP2Q9UDT6 1046 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 DDX19BQ9UMR2 479 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 ADGRA3Q8IWK6 1321 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 RRN3P2A6NIE6 340 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 RSPH10B2B2RC85 870 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 PAPLNO95428 1278 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 RSPH10BP0C881 870 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 AVPR2P30518 371 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 AAMPQ13685 434 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 MFSD10Q14728 455 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 ASPRV1Q53RT3 343 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 FTSJ3Q8IY81 847 aaKnown RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 SMRP1Q8NCR6 262 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 DDX1Q92499 740 aaKnown RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 CASP10Q92851 521 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 SECISBP2LQ93073 1101 aaKnown RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 YME1L1Q96TA2 773 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 GPR20Q99678 358 aa6.7□□□□□ -1.34
CXXC4-202ENST00000466963 ELAC1Q9H777 363 aaKnown RBP6.7□□□□□ -1.34
CXXC4-202ENST00000466963 KDM3AQ9Y4C1 1321 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 LCTP09848 1927 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 TMEM232C9JQI7 657 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 MAFGO15525 162 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 RNF113AO15541 343 aaKnown RBP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 SNHG28P0DPA3 235 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 TXNP10599 105 aaKnown RBP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 NEDD9Q14511 834 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 ZNF528Q3MIS6 628 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 GNPTABQ3T906 1256 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 CEP85Q6P2H3 762 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 RUFY4Q6ZNE9 571 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 HDAC7Q8WUI4 952 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 NKD2Q969F2 451 aaPredicted RBP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 RIPOR3Q96MK2 946 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 NEK1Q96PY6 1258 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 FBXO28Q9NVF7 368 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 PRR12Q9ULL5 1215 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 RIPK3Q9Y572 518 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 C17orf102A2RUQ5 167 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 PRR23AA6NEV1 266 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 ID4P47928 161 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 PPFIBP1Q86W92 1011 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 DHX37Q8IY37 1157 aaKnown RBP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 ATP8B4Q8TF62 1192 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 ATOH1Q92858 354 aaPredicted RBP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 CDCA7LQ96GN5 454 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 NECAB3Q96P71 396 aaPredicted RBP6.69□□□□□ -1.34
CXXC4-202ENST00000466963 SENP7Q9BQF6 1050 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 SORCS3Q9UPU3 1222 aa6.69□□□□□ -1.34
CXXC4-202ENST00000466963 ZFP37Q9Y6Q3 630 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms