RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 LY6KQ17RY6 165 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 NBPF20Q3BBV1 942 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 SKAP1Q86WV1 359 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 AFG1LQ8WV93 481 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 RRP36Q96EU6 259 aaKnown RBP28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 IL23AQ9NPF7 189 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 MRVI1Q9Y6F6 885 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 MMP3P08254 477 aa28.98■■■□□ 2.23
SDF2L1-202ENST00000466935 PGM5Q15124 567 aa28.98■■■□□ 2.23
SDF2L1-202ENST00000466935 RASIP1Q5U651 963 aa28.98■■■□□ 2.23
SDF2L1-202ENST00000466935 C16orf59Q7L2K0 433 aa28.98■■■□□ 2.23
SDF2L1-202ENST00000466935 SGMS1Q86VZ5 419 aa28.98■■■□□ 2.23
SDF2L1-202ENST00000466935 MYL10Q9BUA6 226 aa28.98■■■□□ 2.23
SDF2L1-202ENST00000466935 FRMPD4Q14CM0 1322 aa28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 CCND2P30279 289 aa28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 LAMC2Q13753 1193 aa28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 TSGA10IPQ3SY00 556 aa28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 SEC63Q9UGP8 760 aaKnown RBP28.97■■■□□ 2.23
SDF2L1-202ENST00000466935 TGFB3P10600 412 aa28.96■■■□□ 2.23
SDF2L1-202ENST00000466935 CASTP20810 708 aaKnown RBP28.96■■■□□ 2.23
SDF2L1-202ENST00000466935 TRMT13Q9NUP7 481 aaKnown RBP28.96■■■□□ 2.23
SDF2L1-202ENST00000466935 SLC12A7Q9Y666 1083 aa28.96■■■□□ 2.23
SDF2L1-202ENST00000466935 STAM2O75886 525 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 RGS20O76081 388 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 MYCLP12524 364 aaPredicted RBP28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 DGKDQ16760 1214 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 SESTD1Q86VW0 696 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 PPTC7Q8NI37 304 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 CCDC136Q96JN2 1154 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 WNT8AQ9H1J5 351 aa28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 MTIF3Q9H2K0 278 aaKnown RBP28.95■■■□□ 2.22
SDF2L1-202ENST00000466935 UMODL1Q5DID0 1318 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 COL9A3Q14050 684 aaPredicted RBP28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 FAM47CQ5HY64 1035 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 ZNF365Q70YC5 407 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 FCHSD1Q86WN1 690 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 IL31RAQ8NI17 732 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 HERVK_113Q902F9 699 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 GUCD1Q96NT3 240 aa28.94■■■□□ 2.22
SDF2L1-202ENST00000466935 COL6A3P12111 3177 aa28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 PIK3CDO00329 1044 aa28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 HOXD8P13378 290 aaPredicted RBP28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 KRT32Q14532 448 aa28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 DHX37Q8IY37 1157 aaKnown RBP28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 RPUSD2Q8IZ73 545 aaKnown RBP28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 SRBD1Q8N5C6 995 aaKnown RBP28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 NEK1Q96PY6 1258 aa28.93■■■□□ 2.22
SDF2L1-202ENST00000466935 TANC1Q9C0D5 1861 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 PITPNM1O00562 1244 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 PLEKHA8P1O95397 391 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 PFKMP08237 780 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 ACRP10323 421 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 FANCBQ8NB91 859 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 PIBF1Q8WXW3 757 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 CUL5Q93034 780 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 KATNAL1Q9BW62 490 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 SEMA6BQ9H3T3 888 aa28.92■■■□□ 2.22
SDF2L1-202ENST00000466935 FGBP02675 491 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 CYP2C9P11712 490 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 CCL23P55773 120 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 GNPTABQ3T906 1256 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 CELF3Q5SZQ8 465 aaKnown RBP28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 MYSM1Q5VVJ2 828 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 SYNE3Q6ZMZ3 975 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 KAT2BQ92831 832 aa28.91■■■□□ 2.22
SDF2L1-202ENST00000466935 PPFIA4O75335 1185 aa28.9■■■□□ 2.22
SDF2L1-202ENST00000466935 XRRA1Q6P2D8 792 aa28.9■■■□□ 2.22
SDF2L1-202ENST00000466935 TMTC3Q6ZXV5 915 aa28.9■■■□□ 2.22
SDF2L1-202ENST00000466935 DHX32Q7L7V1 743 aaKnown RBP28.9■■■□□ 2.22
SDF2L1-202ENST00000466935 LRRC2Q9BYS8 371 aa28.9■■■□□ 2.22
SDF2L1-202ENST00000466935 F2P00734 622 aa28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 HMGB1P09429 215 aaKnown RBP28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 ICAM3P32942 547 aa28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 RFC2P35250 354 aa28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 EXOSC10Q01780 885 aaKnown RBP28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 APOA5Q6Q788 366 aa28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 SMARCC2Q8TAQ2 1214 aa28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 FAM161BQ96MY7 647 aa28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 INPP4AQ96PE3 977 aaPredicted RBP28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 TTYH1Q9H313 450 aaPredicted RBP28.89■■■□□ 2.22
SDF2L1-202ENST00000466935 GGPS1O95749 300 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 RXRAP19793 462 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 UBA1P22314 1058 aaKnown RBP28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 DNAJB2P25686 324 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 BFSP2Q13515 415 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 MICU3Q86XE3 530 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 TEX2Q8IWB9 1127 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 RASEFQ8IZ41 740 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 RBM28Q9NW13 759 aaKnown RBP28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 NOD1Q9Y239 953 aa28.88■■■□□ 2.21
SDF2L1-202ENST00000466935 MEIS2O14770 477 aa28.87■■■□□ 2.21
SDF2L1-202ENST00000466935 MRPS9P82933 396 aaKnown RBP28.87■■■□□ 2.21
SDF2L1-202ENST00000466935 PCNX4Q63HM2 1172 aa28.87■■■□□ 2.21
SDF2L1-202ENST00000466935 CCDC155Q8N6L0 562 aa28.87■■■□□ 2.21
SDF2L1-202ENST00000466935 SPATA33Q96N06 139 aa28.87■■■□□ 2.21
SDF2L1-202ENST00000466935 TRIP12Q14669 1992 aaPredicted RBP28.86■■■□□ 2.21
SDF2L1-202ENST00000466935 SCN5AQ14524 2016 aa28.86■■■□□ 2.21
SDF2L1-202ENST00000466935 HAS3O00219 553 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms