RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 CYBAP13498 195 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 CCL5P13501 91 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 MTFR1Q15390 333 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 ARHGEF16Q5VV41 709 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 NSUN7Q8NE18 718 aaKnown RBP12.97□□□□□ -0.33
TMCO1-204ENST00000465705 NSUN6Q8TEA1 469 aaKnown RBP12.97□□□□□ -0.33
TMCO1-204ENST00000465705 TAAR1Q96RJ0 339 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.97□□□□□ -0.33
TMCO1-204ENST00000465705 RNF208Q9H0X6 261 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 UNC93B1Q9H1C4 597 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
TMCO1-204ENST00000465705 NRBP1Q9UHY1 535 aa12.97□□□□□ -0.33
TMCO1-204ENST00000465705 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
TMCO1-204ENST00000465705 ESYT2A0FGR8 921 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 SMCO2A6NFE2 343 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 CCDC85CA6NKD9 419 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 MEIS2O14770 477 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
TMCO1-204ENST00000465705 EIF2AK2P19525 551 aaKnown RBP12.96□□□□□ -0.33
TMCO1-204ENST00000465705 CNGA1P29973 690 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 CCND3P30281 292 aaPredicted RBP12.96□□□□□ -0.33
TMCO1-204ENST00000465705 PDE4DQ08499 809 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 USP17L6PQ6QN14 398 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 TEX2Q8IWB9 1127 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 WASF1Q92558 559 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
TMCO1-204ENST00000465705 KRTAP3-3Q9BYR6 98 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 ABHD16BQ9H3Z7 469 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 C6orf50Q9HD87 102 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 PXMP2Q9NR77 195 aa12.96□□□□□ -0.33
TMCO1-204ENST00000465705 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.34
TMCO1-204ENST00000465705 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 JAK2O60674 1132 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 DTNBO60941 627 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 XBP1P17861 261 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 GNA11P29992 359 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 NLRP5P59047 1200 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 UBE2SQ16763 222 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 FBXO16Q8IX29 292 aaPredicted RBP12.95□□□□□ -0.34
TMCO1-204ENST00000465705 TRPV1Q8NER1 839 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 MORC4Q8TE76 937 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 IWS1Q96ST2 819 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
TMCO1-204ENST00000465705 PAK6Q9NQU5 681 aaPredicted RBP12.95□□□□□ -0.34
TMCO1-204ENST00000465705 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
TMCO1-204ENST00000465705 MCM3APO60318 1980 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 SEPT4O43236 478 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 MSCO60682 206 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 GJB1P08034 283 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 ZNF865P0CJ78 1059 aaPredicted RBP12.94□□□□□ -0.34
TMCO1-204ENST00000465705 AKR1A1P14550 325 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 EDNRBP24530 442 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 ACVR2BQ13705 512 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
TMCO1-204ENST00000465705 REXO1Q8N1G1 1221 aaKnown RBP12.94□□□□□ -0.34
TMCO1-204ENST00000465705 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 BICD2Q8TD16 824 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
TMCO1-204ENST00000465705 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 EHMT1Q9H9B1 1298 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 VTA1Q9NP79 307 aa12.94□□□□□ -0.34
TMCO1-204ENST00000465705 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
TMCO1-204ENST00000465705 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 FOSP01100 380 aaPredicted RBP12.93□□□□□ -0.34
TMCO1-204ENST00000465705 NR3C2P08235 984 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
TMCO1-204ENST00000465705 CCND2P30279 289 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
TMCO1-204ENST00000465705 AP3B2Q13367 1082 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 PGM5Q15124 567 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 STXBP2Q15833 593 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 KATNBL1Q9H079 304 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 FAM184BQ9ULE4 1060 aa12.93□□□□□ -0.34
TMCO1-204ENST00000465705 RARBP10826 455 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 FDPSP14324 419 aaKnown RBP12.92□□□□□ -0.34
TMCO1-204ENST00000465705 GJA8P48165 433 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 CLK2P49760 499 aaKnown RBP12.92□□□□□ -0.34
TMCO1-204ENST00000465705 SOX10P56693 466 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 TRIM29Q14134 588 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 MCTP2Q6DN12 878 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 GALNT17Q6IS24 598 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
TMCO1-204ENST00000465705 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
TMCO1-204ENST00000465705 SHISA4Q96DD7 197 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms