RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CTGFP29279 349 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 ME1P48163 572 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 GRB14Q14449 540 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 ARHGEF6Q15052 776 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 PRR16Q569H4 304 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 C4orf32Q8N8J7 132 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 NSUN6Q8TEA1 469 aaKnown RBP19.54■□□□□ 0.72
PTPRU-206ENST00000465525 GJA10Q969M2 543 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 TRIM47Q96LD4 638 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 FGD4Q96M96 766 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 KIAA1217Q5T5P2 1943 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 NEMFO60524 1076 aa19.53■□□□□ 0.72
PTPRU-206ENST00000465525 COBLO75128 1261 aa19.53■□□□□ 0.72
PTPRU-206ENST00000465525 CYP3A4P08684 503 aa19.53■□□□□ 0.72
PTPRU-206ENST00000465525 ALDH5A1P51649 535 aaPredicted RBP19.53■□□□□ 0.72
PTPRU-206ENST00000465525 MRPS9P82933 396 aaKnown RBP19.53■□□□□ 0.72
PTPRU-206ENST00000465525 ARHGAP39Q9C0H5 1083 aa19.53■□□□□ 0.72
PTPRU-206ENST00000465525 CEP131Q9UPN4 1083 aa19.53■□□□□ 0.72
PTPRU-206ENST00000465525 GOLGA6L22H0YM25 854 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 NR3C2P08235 984 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 ATP2C1P98194 919 aaPredicted RBP19.52■□□□□ 0.72
PTPRU-206ENST00000465525 GRIN1Q05586 938 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 MORN1Q5T089 497 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 PCNX4Q63HM2 1172 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 PPP4R3AQ6IN85 833 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 CD99L2Q8TCZ2 262 aa19.52■□□□□ 0.72
PTPRU-206ENST00000465525 GNRH1P01148 92 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 GCFC2P16383 781 aaKnown RBP19.52■□□□□ 0.71
PTPRU-206ENST00000465525 HOXD10P28358 340 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 DPP9Q86TI2 863 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 TMEM87AQ8NBN3 555 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 KCNG4Q8TDN1 519 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 SOCS4Q8WXH5 440 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 LENG9Q96B70 501 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 CLIC6Q96NY7 704 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 NUDT12Q9BQG2 462 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 LMBRD1Q9NUN5 540 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 SLC5A4Q9NY91 659 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 GJD2Q9UKL4 321 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 PCDHA7Q9UN72 937 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 ZNF236Q9UL36 1845 aa19.52■□□□□ 0.71
PTPRU-206ENST00000465525 IGLV3-22A0A075B6J6 115 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 CYP3A7-CYP3A51PA0A087WV96 503 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 ITGB5P18084 799 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 CYP3A7P24462 503 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 CCND2P30279 289 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 CIITAP33076 1130 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 IL17AQ16552 155 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 CALCRLQ16602 461 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 PLA2G4DQ86XP0 818 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 DNERQ8NFT8 737 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 MBOAT7Q96N66 472 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 ANP32EQ9BTT0 268 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 FBXO2Q9UK22 296 aaPredicted RBP19.51■□□□□ 0.71
PTPRU-206ENST00000465525 ELP1O95163 1332 aa19.51■□□□□ 0.71
PTPRU-206ENST00000465525 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 OR52Z1P0C646 297 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
PTPRU-206ENST00000465525 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
PTPRU-206ENST00000465525 MAP2K5Q13163 448 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 CSPP1Q1MSJ5 1256 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 ZNF792Q3KQV3 632 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 CEP55Q53EZ4 464 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 VSIG10LQ86VR7 867 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 USP6NLQ92738 828 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 NAP1L4Q99733 375 aaKnown RBP19.5■□□□□ 0.71
PTPRU-206ENST00000465525 MXRA8Q9BRK3 442 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 WDR11Q9BZH6 1224 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 PKD2L1Q9P0L9 805 aa19.5■□□□□ 0.71
PTPRU-206ENST00000465525 ADD3Q9UEY8 706 aaKnown RBP19.5■□□□□ 0.71
PTPRU-206ENST00000465525 DIS3Q9Y2L1 958 aaKnown RBP19.5■□□□□ 0.71
PTPRU-206ENST00000465525 VWA3AA6NCI4 1184 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 FOXN1O15353 648 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 BMP15O95972 392 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 ARP10275 920 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 CAP1Q01518 475 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 SPECC1Q5M775 1068 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 MOXD1Q6UVY6 613 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 UBIAD1Q9Y5Z9 338 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 MSH4O15457 936 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 MARCH6O60337 910 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 PPP6R2O75170 966 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 HOXC6P09630 235 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 RGS2P41220 211 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 TXKP42681 527 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 CTCFP49711 727 aaPredicted RBP19.49■□□□□ 0.71
PTPRU-206ENST00000465525 PDE4DQ08499 809 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 Q4G0T1 1027 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 EEPD1Q7L9B9 569 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 KRI1Q8N9T8 703 aaKnown RBP19.49■□□□□ 0.71
PTPRU-206ENST00000465525 NPLOC4Q8TAT6 608 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 HAS1Q92839 578 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 MTMR9Q96QG7 549 aa19.49■□□□□ 0.71
PTPRU-206ENST00000465525 MEIS1O00470 390 aa19.48■□□□□ 0.71
PTPRU-206ENST00000465525 HSPA8P11142 646 aaKnown RBP19.48■□□□□ 0.71
PTPRU-206ENST00000465525 ORC2Q13416 577 aaPredicted RBP19.48■□□□□ 0.71
PTPRU-206ENST00000465525 AXDND1Q5T1B0 1012 aaPredicted RBP19.48■□□□□ 0.71
PTPRU-206ENST00000465525 IWS1Q96ST2 819 aa19.48■□□□□ 0.71
PTPRU-206ENST00000465525 CSRNP2Q9H175 543 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms