RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
SCAMP3-204ENST00000465312 PHF20Q9BVI0 1012 aa21.15■□□□□ 0.98
SCAMP3-204ENST00000465312 PAK6Q9NQU5 681 aaPredicted RBP21.15■□□□□ 0.98
SCAMP3-204ENST00000465312 PDGFCQ9NRA1 345 aa21.15■□□□□ 0.98
SCAMP3-204ENST00000465312 RTEL1Q9NZ71 1219 aa21.15■□□□□ 0.98
SCAMP3-204ENST00000465312 EIF3JO75822 258 aaKnown RBP21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 IGHA2P01877 340 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 GJB1P08034 283 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 KRT2P35908 639 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 GNPTABQ3T906 1256 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 KRT40Q6A162 431 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 FAM177A1Q8N128 213 aaPredicted RBP21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 SNX21Q969T3 373 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 MRVI1Q9Y6F6 885 aa21.14■□□□□ 0.97
SCAMP3-204ENST00000465312 FRMPD4Q14CM0 1322 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 CCDC194A0A1B0GVG4 234 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 CLK2P49760 499 aaKnown RBP21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 TTLL4Q14679 1199 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 PCNX4Q63HM2 1172 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 VSIG10LQ86VR7 867 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 SCFD2Q8WU76 684 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 WDR11Q9BZH6 1224 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 XPNPEP3Q9NQH7 507 aa21.13■□□□□ 0.97
SCAMP3-204ENST00000465312 POTEFA5A3E0 1075 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 H3BQV1 296 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 ADAMTS3O15072 1205 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 SGPL1O95470 568 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 TXNP10599 105 aaKnown RBP21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 IQSEC1Q6DN90 963 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 TAPT1Q6NXT6 567 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 NLRX1Q86UT6 975 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 DAGLBQ8NCG7 672 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 KATNBL1Q9H079 304 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 SPC25Q9HBM1 224 aa21.12■□□□□ 0.97
SCAMP3-204ENST00000465312 STAM2O75886 525 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 MMP1P03956 469 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 GJA8P48165 433 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 ARHGAP4P98171 946 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 XRRA1Q6P2D8 792 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 KRT25Q7Z3Z0 450 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 DIS3L2Q8IYB7 885 aaKnown RBP21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 AP5M1Q9H0R1 490 aa21.11■□□□□ 0.97
SCAMP3-204ENST00000465312 SORBS3O60504 671 aa21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 PGK1P00558 417 aa21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 EN2P19622 333 aaPredicted RBP21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 SREBF1P36956 1147 aa21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 MRPS9P82933 396 aaKnown RBP21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 CUL4AQ13619 759 aa21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 NONOQ15233 471 aaKnown RBP eCLIP21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 GJC2Q5T442 439 aaPredicted RBP21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 TLK2Q86UE8 772 aa21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 OXER1Q8TDS5 423 aa21.1■□□□□ 0.97
SCAMP3-204ENST00000465312 FRMPD3Q5JV73 1810 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 DYNC1LI2O43237 492 aaPredicted RBP21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 DUSP11O75319 330 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 SMPD1P17405 629 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 LY6KQ17RY6 165 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 MCTP1Q6DN14 999 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 PIK3AP1Q6ZUJ8 805 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 SPRYD3Q8NCJ5 442 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 OR6J1Q8NGC5 347 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 TBCKQ8TEA7 893 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 PKD2L1Q9P0L9 805 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 KIAA1217Q5T5P2 1943 aa21.09■□□□□ 0.97
SCAMP3-204ENST00000465312 SYNRGQ9UMZ2 1314 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 KBTBD13C9JR72 458 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 ADCY6O43306 1168 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 NR5A1Q13285 461 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 MTMR1Q13613 665 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 DUSP28Q4G0W2 176 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 LHX8Q68G74 356 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 KCNV1Q6PIU1 500 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 RNF180Q86T96 592 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 ARRDC4Q8NCT1 418 aa21.08■□□□□ 0.97
SCAMP3-204ENST00000465312 BTBD18B2RXH4 712 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 NKRFO15226 690 aaKnown RBP eCLIP21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 FIBPO43427 364 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 ARIH2O95376 493 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 PTGS1P23219 599 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 BECN1Q14457 450 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 NPY5RQ15761 445 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 INF2Q27J81 1249 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 TMEM63BQ5T3F8 832 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 LARP1BQ659C4 914 aaKnown RBP21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 COPS5Q92905 334 aa21.07■□□□□ 0.96
SCAMP3-204ENST00000465312 MYH7BA7E2Y1 1941 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 RBM47A0AV96 593 aaKnown RBP21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 GH1P01241 217 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 BRDTQ58F21 947 aaPredicted RBP21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 DHX37Q8IY37 1157 aaKnown RBP21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 FBXO18Q8NFZ0 1043 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 GPRASP2Q96D09 838 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 CDHR1Q96JP9 859 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 INPP4AQ96PE3 977 aaPredicted RBP21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 MXRA8Q9BRK3 442 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 MLXIPQ9HAP2 919 aa21.06■□□□□ 0.96
SCAMP3-204ENST00000465312 OGDHLQ9ULD0 1010 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms