RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 IGDCC4Q8TDY8 1250 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 VWCEQ96DN2 955 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 MAP3K14Q99558 947 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 UNC80Q8N2C7 3258 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 GRXCR1A8MXD5 290 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 PBX2P40425 430 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 LAMC2Q13753 1193 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 DGKDQ16760 1214 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 SCLYQ96I15 445 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 PIGSQ96S52 555 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 RBM8AQ9Y5S9 174 aaKnown RBP16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
SNRNP40-203ENST00000463988 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 GCOM1H8Y6P7 765 aaPredicted RBP16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 CYTH3O43739 400 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 POLR2MP0CAP2 368 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 ANTXR2P58335 489 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 BFSP2Q13515 415 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 HOMER1Q86YM7 354 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 KAT2BQ92831 832 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 SLC4A7Q9Y6M7 1214 aa16.65■□□□□ 0.26
SNRNP40-203ENST00000463988 MYO9BQ13459 2157 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 RGS20O76081 388 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 TGFB3P10600 412 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 SMARCA1P28370 1054 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 PGM5Q15124 567 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 CCDC155Q8N6L0 562 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
SNRNP40-203ENST00000463988 TTC28Q96AY4 2481 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 PPFIA4O75335 1185 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 DDAH1O94760 285 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 ACTN1P12814 892 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 CCND2P30279 289 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 HOXA13P31271 388 aaPredicted RBP16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 PTGISQ16647 500 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 KATNAL1Q9BW62 490 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 LSG1Q9H089 658 aaKnown RBP16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 LY9Q9HBG7 655 aa16.63■□□□□ 0.25
SNRNP40-203ENST00000463988 F2P00734 622 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 KIF5BP33176 963 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 MCM5P33992 734 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 RBL2Q08999 1139 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 CELF3Q5SZQ8 465 aaKnown RBP16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 MYSM1Q5VVJ2 828 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 GAS2L1Q99501 681 aaPredicted RBP16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
SNRNP40-203ENST00000463988 ZBBXA8MT70 800 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 HAS3O00219 553 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 PRC1O43663 620 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 STAM2O75886 525 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 PARNO95453 639 aaKnown RBP16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 ATP2A2P16615 1042 aaKnown RBP16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 PSEN2P49810 448 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 GNAQP50148 359 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 IL31RAQ8NI17 732 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 PHOSPHO2Q8TCD6 241 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 RRP36Q96EU6 259 aaKnown RBP16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 NKX2-4Q9H2Z4 354 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 GTF2IRD1Q9UHL9 959 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 YBX2Q9Y2T7 364 aaKnown RBP16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 FRMPD4Q14CM0 1322 aa16.61■□□□□ 0.25
SNRNP40-203ENST00000463988 GGPS1O95749 300 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 LIFRP42702 1097 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 MFSD10Q14728 455 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 GNPTABQ3T906 1256 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 FCHSD1Q86WN1 690 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 SLC9A7Q96T83 725 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
SNRNP40-203ENST00000463988 PRUNE2Q8WUY3 3088 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms