RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 PDGFCQ9NRA1 345 aa21.95■■□□□ 1.1
XPA-202ENST00000462523 ADCY6O43306 1168 aa21.94■■□□□ 1.1
XPA-202ENST00000462523 SYT1P21579 422 aa21.94■■□□□ 1.1
XPA-202ENST00000462523 CCND2P30279 289 aa21.94■■□□□ 1.1
XPA-202ENST00000462523 ARHGAP4P98171 946 aa21.94■■□□□ 1.1
XPA-202ENST00000462523 CNPY2Q9Y2B0 182 aa21.94■■□□□ 1.1
XPA-202ENST00000462523 RBM19Q9Y4C8 960 aaKnown RBP21.94■■□□□ 1.1
XPA-202ENST00000462523 EIF3JO75822 258 aaKnown RBP21.93■■□□□ 1.1
XPA-202ENST00000462523 MYCP01106 439 aaPredicted RBP21.93■■□□□ 1.1
XPA-202ENST00000462523 TMEM63BQ5T3F8 832 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 PIK3AP1Q6ZUJ8 805 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 KRT25Q7Z3Z0 450 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 TBCKQ8TEA7 893 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 MPHOSPH6Q99547 160 aaKnown RBP21.93■■□□□ 1.1
XPA-202ENST00000462523 UNC93B1Q9H1C4 597 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 EHMT1Q9H9B1 1298 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 BRMS1Q9HCU9 246 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 VTA1Q9NP79 307 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 RTEL1Q9NZ71 1219 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 NRBP1Q9UHY1 535 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 ZHX1Q9UKY1 873 aaPredicted RBP21.93■■□□□ 1.1
XPA-202ENST00000462523 FRMPD3Q5JV73 1810 aa21.93■■□□□ 1.1
XPA-202ENST00000462523 B4DLN1 442 aa21.92■■□□□ 1.1
XPA-202ENST00000462523 ITGB5P18084 799 aa21.92■■□□□ 1.1
XPA-202ENST00000462523 CYP2W1Q8TAV3 490 aa21.92■■□□□ 1.1
XPA-202ENST00000462523 INPP4AQ96PE3 977 aaPredicted RBP21.92■■□□□ 1.1
XPA-202ENST00000462523 FOXP1Q9H334 677 aaPredicted RBP21.92■■□□□ 1.1
XPA-202ENST00000462523 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.91■■□□□ 1.1
XPA-202ENST00000462523 CYP3A4P08684 503 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 PTGS1P23219 599 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 U2AF2P26368 475 aaKnown RBP eCLIP21.91■■□□□ 1.1
XPA-202ENST00000462523 NONOQ15233 471 aaKnown RBP eCLIP21.91■■□□□ 1.1
XPA-202ENST00000462523 SAFBQ15424 915 aaKnown RBP eCLIP21.91■■□□□ 1.1
XPA-202ENST00000462523 INF2Q27J81 1249 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 CCDC144BQ3MJ40 725 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 XRRA1Q6P2D8 792 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 UBIAD1Q9Y5Z9 338 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 CCDC194A0A1B0GVG4 234 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 RBM47A0AV96 593 aaKnown RBP21.91■■□□□ 1.1
XPA-202ENST00000462523 FAM86B1E9PN63 330 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 H3BQV1 296 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 ARIH2O95376 493 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 FAM86B2P0C5J1 330 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 CCL5P13501 91 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 PDCP20941 246 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 ADCYAP1R1P41586 468 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 SEMA3FQ13275 785 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 IFFO2Q5TF58 517 aa21.91■■□□□ 1.1
XPA-202ENST00000462523 LENG1Q96BZ8 264 aaPredicted RBP21.91■■□□□ 1.1
XPA-202ENST00000462523 WNT7AO00755 349 aa21.9■■□□□ 1.1
XPA-202ENST00000462523 STAM2O75886 525 aa21.9■■□□□ 1.1
XPA-202ENST00000462523 ANP32AP39687 249 aaKnown RBP21.9■■□□□ 1.1
XPA-202ENST00000462523 SEPT14Q6ZU15 432 aa21.9■■□□□ 1.1
XPA-202ENST00000462523 NOSTRINQ8IVI9 506 aa21.9■■□□□ 1.1
XPA-202ENST00000462523 WDR11Q9BZH6 1224 aa21.9■■□□□ 1.1
XPA-202ENST00000462523 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.9■■□□□ 1.1
XPA-202ENST00000462523 HMX1Q9NP08 348 aaPredicted RBP21.9■■□□□ 1.1
XPA-202ENST00000462523 PAK6Q9NQU5 681 aaPredicted RBP21.9■■□□□ 1.1
XPA-202ENST00000462523 IGLV3-22A0A075B6J6 115 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 VPS37CA5D8V6 355 aaPredicted RBP21.89■■□□□ 1.09
XPA-202ENST00000462523 SEPT4O43236 478 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 CNGA1P29973 690 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 CIITAP33076 1130 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 PKP1Q13835 747 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 CCDC62Q6P9F0 684 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 MTMR6Q9Y217 621 aa21.89■■□□□ 1.09
XPA-202ENST00000462523 STX6O43752 255 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 SMPD1P17405 629 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 USP11P51784 963 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 CEP55Q53EZ4 464 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 GJC2Q5T442 439 aaPredicted RBP21.88■■□□□ 1.09
XPA-202ENST00000462523 ANO1Q5XXA6 986 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 MCTP1Q6DN14 999 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 LENG9Q96B70 501 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 MXRA8Q9BRK3 442 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 DOCK5Q9H7D0 1870 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 JADE2Q9NQC1 790 aa21.88■■□□□ 1.09
XPA-202ENST00000462523 MEIS1O00470 390 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 TDP2O95551 362 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 AKR1A1P14550 325 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 SP2Q02086 613 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 LHX8Q68G74 356 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 NEK8Q86SG6 692 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 SCFD2Q8WU76 684 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 RNF208Q9H0X6 261 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 POTEFA5A3E0 1075 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 SPATA31C2B4DYI2 1134 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 ICAM3P32942 547 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 DDX20Q9UHI6 824 aaKnown RBP21.87■■□□□ 1.09
XPA-202ENST00000462523 FAM184BQ9ULE4 1060 aa21.87■■□□□ 1.09
XPA-202ENST00000462523 GNEQ9Y223 722 aaKnown RBP21.87■■□□□ 1.09
XPA-202ENST00000462523 CYP3A7-CYP3A51PA0A087WV96 503 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 ARP10275 920 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 CYP3A7P24462 503 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 TNFAIP2Q03169 654 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 MTMR1Q13613 665 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 LY6KQ17RY6 165 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 LETM2Q2VYF4 491 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 IQSEC1Q6DN90 963 aa21.86■■□□□ 1.09
XPA-202ENST00000462523 FERMT3Q86UX7 667 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms