RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CD4P01730 458 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 ACRP10323 421 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 ITGB8P26012 769 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
LDB1-203ENST00000461873 RAB30Q15771 203 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 NBPF20Q3BBV1 942 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 ZNF365Q70YC5 407 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 ZNF654Q8IZM8 581 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 AFG1LQ8WV93 481 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 TBC1D5Q92609 795 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 COPS5Q92905 334 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 GAS2L1Q99501 681 aaPredicted RBP10.24□□□□□ -0.77
LDB1-203ENST00000461873 MAP3K14Q99558 947 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.24□□□□□ -0.77
LDB1-203ENST00000461873 ESYT1Q9BSJ8 1104 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 IL25Q9H293 177 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 EHMT1Q9H9B1 1298 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 NAP1L2Q9ULW6 460 aaPredicted RBP10.24□□□□□ -0.77
LDB1-203ENST00000461873 SLC4A7Q9Y6M7 1214 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 LAMA3Q16787 3333 aa10.24□□□□□ -0.77
LDB1-203ENST00000461873 KIF28PB7ZC32 967 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 CDC45O75419 566 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 STAM2O75886 525 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 TGFB3P10600 412 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 FOSL2P15408 326 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 RFC2P35250 354 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 HSD17B4P51659 736 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 KRT32Q14532 448 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 PTGISQ16647 500 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 BMP2KLQ5H9B9 411 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 CREB3L3Q68CJ9 461 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 OTOP2Q7RTS6 562 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 NLRX1Q86UT6 975 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 SLC43A3Q8NBI5 491 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 TIFAQ96CG3 184 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 SPATA33Q96N06 139 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 SEMA6BQ9H3T3 888 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 RIOX1Q9H6W3 641 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 TRMT13Q9NUP7 481 aaKnown RBP10.23□□□□□ -0.77
LDB1-203ENST00000461873 LRRC37A2A6NM11 1700 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 MYH7BA7E2Y1 1941 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 LCTP09848 1927 aa10.23□□□□□ -0.77
LDB1-203ENST00000461873 SPDYE3A6NKU9 549 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 SLC27A2O14975 620 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 MMP3P08254 477 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 HMGB1P09429 215 aaKnown RBP10.22□□□□□ -0.77
LDB1-203ENST00000461873 CYP2C9P11712 490 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 PTGS1P23219 599 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 DNAJB2P25686 324 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 SMARCA1P28370 1054 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 LIFRP42702 1097 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 EPHB4P54760 987 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 TROAPQ12815 778 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 NEDD9Q14511 834 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 PGM5Q15124 567 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 TMEM240Q5SV17 173 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 TMEM63BQ5T3F8 832 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 STOX1Q6ZVD7 989 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 DEFB128Q7Z7B8 93 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 MB21D2Q8IYB1 491 aaPredicted RBP10.22□□□□□ -0.77
LDB1-203ENST00000461873 PPTC7Q8NI37 304 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 IGDCC4Q8TDY8 1250 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 NEK1Q96PY6 1258 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 PDCD2LQ9BRP1 358 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 ALG1Q9BT22 464 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 NOC4LQ9BVI4 516 aaKnown RBP10.22□□□□□ -0.77
LDB1-203ENST00000461873 SLC28A3Q9HAS3 691 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 RBM28Q9NW13 759 aaKnown RBP10.22□□□□□ -0.77
LDB1-203ENST00000461873 DDX41Q9UJV9 622 aaKnown RBP10.22□□□□□ -0.77
LDB1-203ENST00000461873 KIAA1217Q5T5P2 1943 aa10.22□□□□□ -0.77
LDB1-203ENST00000461873 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
LDB1-203ENST00000461873 SORBS3O60504 671 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 PARNO95453 639 aaKnown RBP10.21□□□□□ -0.77
LDB1-203ENST00000461873 GGPS1O95749 300 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 KCNJ6P48051 423 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 VSIG10LQ86VR7 867 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 MICU3Q86XE3 530 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 CCDC82Q8N4S0 544 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 GIMAP8Q8ND71 665 aaPredicted RBP10.21□□□□□ -0.77
LDB1-203ENST00000461873 CAGE1Q8TC20 777 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 HERVK_113Q902F9 699 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 MTMR8Q96EF0 704 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 SCLYQ96I15 445 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 CDHR1Q96JP9 859 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 CDX2Q99626 313 aaPredicted RBP10.21□□□□□ -0.77
LDB1-203ENST00000461873 MYL10Q9BUA6 226 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 SPZ1Q9BXG8 430 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 LSG1Q9H089 658 aaKnown RBP10.21□□□□□ -0.77
LDB1-203ENST00000461873 ZNF576Q9H609 170 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 PSTPIP2Q9H939 334 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 LY9Q9HBG7 655 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 COL20A1Q9P218 1284 aa10.21□□□□□ -0.77
LDB1-203ENST00000461873 ZNF215Q9UL58 517 aaPredicted RBP10.21□□□□□ -0.77
LDB1-203ENST00000461873 DLL1O00548 723 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 SH2B2O14492 632 aaPredicted RBP10.2□□□□□ -0.78
LDB1-203ENST00000461873 GRIN2DO15399 1336 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 ARIH2O95376 493 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 GNAT1P11488 350 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms