RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 SKIV2LQ15477 1246 aaKnown RBP17.97■□□□□ 0.47
SF3A3-203ENST00000461869 FAM47CQ5HY64 1035 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 SYDE2Q5VT97 1194 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 BTNL9Q6UXG8 535 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 Q6ZUG5 572 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 AGXT2Q9BYV1 514 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 TOMM22Q9NS69 142 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 RAPGEFL1Q9UHV5 662 aa17.97■□□□□ 0.47
SF3A3-203ENST00000461869 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
SF3A3-203ENST00000461869 B4E1Z4 1266 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 ORC4O43929 436 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 CA3P07451 260 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 BMP1P13497 986 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 CALML3P27482 149 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 CUL4AQ13619 759 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 AAK1Q2M2I8 961 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 NBPF20Q3BBV1 942 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 BRDTQ58F21 947 aaPredicted RBP17.96■□□□□ 0.47
SF3A3-203ENST00000461869 INTS4Q96HW7 963 aaKnown RBP17.96■□□□□ 0.47
SF3A3-203ENST00000461869 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 MUC3AQ02505 3323 aa17.96■□□□□ 0.47
SF3A3-203ENST00000461869 RFXAPO00287 272 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 TOP1P11387 765 aaKnown RBP17.95■□□□□ 0.46
SF3A3-203ENST00000461869 RFC2P35250 354 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 TFF2Q03403 129 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 PDE4DQ08499 809 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 TOB2Q14106 344 aaPredicted RBP17.95■□□□□ 0.46
SF3A3-203ENST00000461869 SLC30A10Q6XR72 485 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 RETREG2Q8NC44 543 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 CLEC4DQ8WXI8 215 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 TCEANC2Q96MN5 208 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 NECAB3Q96P71 396 aaPredicted RBP17.95■□□□□ 0.46
SF3A3-203ENST00000461869 MPHOSPH6Q99547 160 aaKnown RBP17.95■□□□□ 0.46
SF3A3-203ENST00000461869 TMEM47Q9BQJ4 181 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 CERS4Q9HA82 394 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 LCTP09848 1927 aa17.95■□□□□ 0.46
SF3A3-203ENST00000461869 ERICH2A1L162 156 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 NKRFO15226 690 aaKnown RBP eCLIP17.94■□□□□ 0.46
SF3A3-203ENST00000461869 GTPBP6O43824 516 aaPredicted RBP17.94■□□□□ 0.46
SF3A3-203ENST00000461869 KPNA6O60684 536 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 KDM4AO75164 1064 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 PPP2R5BQ15173 497 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 RRP12Q5JTH9 1297 aaKnown RBP17.94■□□□□ 0.46
SF3A3-203ENST00000461869 NFRKBQ6P4R8 1299 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 PHOSPHO2Q8TCD6 241 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 PPP1R13LQ8WUF5 828 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 BRF1Q92994 677 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 SLC9A7Q96T83 725 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 FTOQ9C0B1 505 aaKnown RBP eCLIP17.94■□□□□ 0.46
SF3A3-203ENST00000461869 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 MTCH2Q9Y6C9 303 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 MYO9BQ13459 2157 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
SF3A3-203ENST00000461869 POU3F3P20264 500 aaPredicted RBP17.93■□□□□ 0.46
SF3A3-203ENST00000461869 ANTXR2P58335 489 aa17.93■□□□□ 0.46
SF3A3-203ENST00000461869 IQCA1Q86XH1 822 aa17.93■□□□□ 0.46
SF3A3-203ENST00000461869 SCFD2Q8WU76 684 aa17.93■□□□□ 0.46
SF3A3-203ENST00000461869 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
SF3A3-203ENST00000461869 TCP11L1Q9NUJ3 509 aa17.93■□□□□ 0.46
SF3A3-203ENST00000461869 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.93■□□□□ 0.46
SF3A3-203ENST00000461869 A6NJR5 290 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 PDHBP11177 359 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 KCNQ1P51787 676 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 RPS6P62753 249 aaKnown RBP17.92■□□□□ 0.46
SF3A3-203ENST00000461869 PTPN11Q06124 597 aaPredicted RBP17.92■□□□□ 0.46
SF3A3-203ENST00000461869 BFSP2Q13515 415 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 COL9A3Q14050 684 aaPredicted RBP17.92■□□□□ 0.46
SF3A3-203ENST00000461869 CCDC178Q5BJE1 867 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 CYB5R4Q7L1T6 521 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 TMTC2Q8N394 836 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 DNERQ8NFT8 737 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 COPS5Q92905 334 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 LRRC2Q9BYS8 371 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 TPCN1Q9ULQ1 816 aa17.92■□□□□ 0.46
SF3A3-203ENST00000461869 EPOPA6NHQ4 379 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 SH2B2O14492 632 aaPredicted RBP17.91■□□□□ 0.46
SF3A3-203ENST00000461869 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
SF3A3-203ENST00000461869 TXNP10599 105 aaKnown RBP17.91■□□□□ 0.46
SF3A3-203ENST00000461869 EDNRBP24530 442 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 LIFRP42702 1097 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 EVCP57679 992 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 CHMP4BP1P59074 171 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 HERC6Q8IVU3 1022 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 ZNF274Q96GC6 653 aaPredicted RBP17.91■□□□□ 0.46
SF3A3-203ENST00000461869 ZSWIM5Q9P217 1185 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
SF3A3-203ENST00000461869 NOD1Q9Y239 953 aa17.91■□□□□ 0.46
SF3A3-203ENST00000461869 B4DLN1 442 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 MRPL12P52815 198 aaKnown RBP17.9■□□□□ 0.46
SF3A3-203ENST00000461869 TAP1Q03518 808 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 ME3Q16798 604 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 KRT40Q6A162 431 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 C1QTNF1Q9BXJ1 281 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms