RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MOXD1Q6UVY6 613 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 RBM43Q6ZSC3 357 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 DYMQ7RTS9 669 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MIER3Q7Z3K6 550 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ZSCAN30Q86W11 494 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 GPBP1Q86WP2 473 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TRMT44Q8IYL2 757 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PLSCR2Q9NRY7 297 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 IFNKQ9P0W0 207 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 FZD1Q9UP38 647 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 KIAA1024Q9UPX6 916 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MAPK8IP1Q9UQF2 711 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 A0A1B0GUL6 1792 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 FAM237AA0A1B0GTK4 181 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 N4BP3O15049 544 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 FOXN1O15353 648 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ACTN4O43707 911 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 SLC37A4O43826 429 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 DKC1O60832 514 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TAL1P17542 331 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 SFPQP23246 707 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ERCC5P28715 1186 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CCND2P30279 289 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MTIF2P46199 727 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 FXR2P51116 673 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ZNF75DP51815 510 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 GSDMDP57764 484 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CCNA1P78396 465 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PDIA5Q14554 519 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 KCTD2Q14681 263 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TKFCQ3LXA3 575 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TMC6Q7Z403 805 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TPH2Q8IWU9 490 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 NSUN6Q8TEA1 469 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MTMR8Q96EF0 704 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CDHR1Q96JP9 859 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ADD3Q9UEY8 706 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MORC2Q9Y6X9 1032 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 EP400Q96L91 3159 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PHF20L1A8MW92 1017 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CXCL11O14625 94 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 IKBKBO14920 756 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PRR29P0C7W0 189 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 COPB2P35606 906 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 SNAPC2Q13487 334 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 BAATQ14032 418 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MCM6Q14566 821 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 HERC4Q5GLZ8 1057 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MAP1SQ66K74 1059 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MB21D1Q8N884 522 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 NELFBQ8WX92 580 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CTAGE1Q96RT6 745 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PPP1R9BQ96SB3 815 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TAF1DQ9H5J8 278 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 IPO5O00410 1097 aaKnown RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 NFIBO00712 420 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 WNT7AO00755 349 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 IPO7O95373 1038 aaKnown RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 CASP1P29466 404 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 HIRAP54198 1017 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 FANCCQ00597 558 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 RAD51AP2Q09MP3 1159 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 MKRN3Q13064 507 aaKnown RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 GRM1Q13255 1194 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 MTMR1Q13613 665 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 CCDC40Q4G0X9 1142 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 CT47A1Q5JQC4 288 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 FKBP15Q5T1M5 1219 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 ELOA2Q8IYF1 753 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 SAMD3Q8N6K7 520 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 NOC3LQ8WTT2 800 aaKnown RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 SHISA4Q96DD7 197 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 ZFP91Q96JP5 570 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 FUCA2Q9BTY2 467 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 SLC38A10Q9HBR0 1119 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 EMILIN3Q9NT22 766 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 TUBE1Q9UJT0 475 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 SCN9AQ15858 1988 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 POTEB3A0JP26 581 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 POTECB2RU33 542 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 PIK3CDO00329 1044 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 VWA5AO00534 786 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 MEIS2O14770 477 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 PLA2G4BP0C869 781 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 DSG3P32926 999 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 PRELPP51888 382 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 OAZ1P54368 228 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 RPS6P62753 249 aaKnown RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 PPATQ06203 517 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 CUL4BQ13620 913 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 HS1BP3Q53T59 392 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 FAM26FQ5R3K3 315 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 ZNF658Q5TYW1 1059 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 SPATA1Q5VX52 437 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 POTEBQ6S5H4 581 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 CCDC186Q7Z3E2 898 aa4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 SMYD4Q8IYR2 804 aaPredicted RBP4.59□□□□□ -1.67
ATP13A3-206ENST00000461660 CSGALNACT2Q8N6G5 542 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms