RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PRPF38BQ5VTL8 546 aaKnown RBP12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 SLC39A5Q6ZMH5 540 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 VSIG10LQ86VR7 867 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
TRAPPC12-213ENST00000461577 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 PDE4DIPQ5VU43 2346 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 A0A1W2PQ45 241 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 A0A1W2PQY0 241 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 PPFIA3O75145 1194 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 STAM2O75886 525 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 ASGR1P07306 291 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 PTGS1P23219 599 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 RTP1P59025 263 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 NKX3-2P78367 333 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 NTRK3Q16288 839 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 CCSAPQ6IQ19 270 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 COPS5Q92905 334 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 MKI67P46013 3256 aaKnown RBP12.15□□□□□ -0.46
TRAPPC12-213ENST00000461577 MYH7BA7E2Y1 1941 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 H0YGN5 161 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 CTAGE5O15320 804 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 PFKFB2O60825 505 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 CDKL5O76039 1030 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 ARIH2O95376 493 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 GH1P01241 217 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 CPT1AP50416 773 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 SCRN1Q12765 414 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 PKN1Q16512 942 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 GNPTABQ3T906 1256 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 TEX2Q8IWB9 1127 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 C6orf50Q9HD87 102 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
TRAPPC12-213ENST00000461577 CABYRO75952 493 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 DEXIO95424 95 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 FOSP01100 380 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 MYL3P08590 195 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 GNA11P29992 359 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 TRIM60Q495X7 471 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 PCNX4Q63HM2 1172 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 NLRX1Q86UT6 975 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 DDX41Q9UJV9 622 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-213ENST00000461577 ELP1O95163 1332 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 A0A0U1RQG5 324 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 KPNA6O60684 536 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 TGFB3P10600 412 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 NLRP5P59047 1200 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 AP3B2Q13367 1082 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 SNX17Q15036 470 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 C1orf53Q5VUE5 145 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 CXCL17Q6UXB2 119 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 VPS54Q9P1Q0 977 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 ZMYND8Q9ULU4 1186 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-213ENST00000461577 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 A6NJR5 290 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 FIBPO43427 364 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 SORBS3O60504 671 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 RGS20O76081 388 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 GGPS1O95749 300 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 SYN1P17600 705 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 ICAM3P32942 547 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 LAMC2Q13753 1193 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 ME3Q16798 604 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 JAKMIP3Q5VZ66 844 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 INPP4AQ96PE3 977 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 ANO3Q9BYT9 981 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms