RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 GJB5O95377 273 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 STXBP2Q15833 593 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 DGKDQ16760 1214 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 SYTL5Q8TDW5 730 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 KAT2BQ92831 832 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 HLA-CQ95604 372 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 HAS3O00219 553 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 KCNQ1P51787 676 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 TFF2Q03403 129 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 PTK7Q13308 1070 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 GRB10Q13322 594 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 FTOQ9C0B1 505 aaKnown RBP eCLIP17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 MUC6Q6W4X9 2439 aa17.02■□□□□ 0.32
DNMT3A-207ENST00000461228 CAND2O75155 1236 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 ARHGEF15O94989 841 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 HOXC8P31273 242 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 HSD17B4P51659 736 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 GPNMBQ14956 572 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 ARNTL2Q8WYA1 636 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 COPS5Q92905 334 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
DNMT3A-207ENST00000461228 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 EIF3JO75822 258 aaKnown RBP17■□□□□ 0.31
DNMT3A-207ENST00000461228 CKBP12277 381 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 ERVK-21P61565 698 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
DNMT3A-207ENST00000461228 LAMC2Q13753 1193 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 SKIV2LQ15477 1246 aaKnown RBP17■□□□□ 0.31
DNMT3A-207ENST00000461228 USH1GQ495M9 461 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 TRAF7Q6Q0C0 670 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 FAM122AQ96E09 287 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 RMDN3Q96TC7 470 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 RAD9AQ99638 391 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 COL20A1Q9P218 1284 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 DDX41Q9UJV9 622 aaKnown RBP17■□□□□ 0.31
DNMT3A-207ENST00000461228 HCN4Q9Y3Q4 1203 aa17■□□□□ 0.31
DNMT3A-207ENST00000461228 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 TRAF1Q13077 416 aa16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 TRIM71Q2Q1W2 868 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 SP7Q8TDD2 431 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 CHMP4CQ96CF2 233 aa16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 SAMD11Q96NU1 681 aa16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 TGS1Q96RS0 853 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 PXMP2Q9NR77 195 aa16.99■□□□□ 0.31
DNMT3A-207ENST00000461228 HIP1O00291 1037 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 ZNF213O14771 459 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 NBNO60934 754 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 TGFB3P10600 412 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 HAND2P61296 217 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 QRICH1Q2TAL8 776 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 ADGRF4Q8IZF3 695 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 NECAB3Q96P71 396 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 DSCC1Q9BVC3 393 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
DNMT3A-207ENST00000461228 FRMPD4Q14CM0 1322 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 GPR37L1O60883 481 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 PPFIA4O75335 1185 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 PSEN2P49810 448 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 HTRA4P83105 476 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 IKBKEQ14164 716 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 MFSD10Q14728 455 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 STOX1Q6ZVD7 989 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 SERINC5Q86VE9 423 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 ZSCAN10Q96SZ4 725 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 MRVI1Q9Y6F6 885 aa16.97■□□□□ 0.31
DNMT3A-207ENST00000461228 LCHNA4D1U4 455 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 LINC01553A4QN01 128 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 RFXAPO00287 272 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 OPLAHO14841 1288 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 NR3C2P08235 984 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 GOLGA8HP0CJ92 632 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 DEFB103AP81534 67 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 COL19A1Q14993 1142 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 KIAA0753Q2KHM9 967 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 ARHGEF16Q5VV41 709 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 TAAR1Q96RJ0 339 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 PDCD2LQ9BRP1 358 aa16.96■□□□□ 0.31
DNMT3A-207ENST00000461228 KRT23Q9C075 422 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms