RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 RMDN3Q96TC7 470 aa15.8■□□□□ 0.12
CHRD-209ENST00000461120 PCDHA4Q9UN74 947 aa15.8■□□□□ 0.12
CHRD-209ENST00000461120 KIF3AQ9Y496 699 aa15.8■□□□□ 0.12
CHRD-209ENST00000461120 ARIH1Q9Y4X5 557 aaPredicted RBP15.8■□□□□ 0.12
CHRD-209ENST00000461120 CLK2P49760 499 aaKnown RBP15.79■□□□□ 0.12
CHRD-209ENST00000461120 TRIM29Q14134 588 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 BECN1Q14457 450 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 KRT40Q6A162 431 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 MAMDC4Q6UXC1 1216 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 REXO1Q8N1G1 1221 aaKnown RBP15.79■□□□□ 0.12
CHRD-209ENST00000461120 MSL3Q8N5Y2 521 aaKnown RBP15.79■□□□□ 0.12
CHRD-209ENST00000461120 SLAIN1Q8ND83 568 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
CHRD-209ENST00000461120 TINF2Q9BSI4 451 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 PXMP2Q9NR77 195 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 FOXD4L1Q9NU39 408 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 TMEM260Q9NX78 707 aa15.79■□□□□ 0.12
CHRD-209ENST00000461120 ZMYND8Q9ULU4 1186 aaPredicted RBP15.79■□□□□ 0.12
CHRD-209ENST00000461120 FRMPD4Q14CM0 1322 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 LOC102724159A0A0B4J2E5 919 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 ASB14A6NK59 587 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 FOSP01100 380 aaPredicted RBP15.78■□□□□ 0.12
CHRD-209ENST00000461120 HMGCRP04035 888 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 MAGEA10P43363 369 aaPredicted RBP15.78■□□□□ 0.12
CHRD-209ENST00000461120 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 PWP2Q15269 919 aaKnown RBP15.78■□□□□ 0.12
CHRD-209ENST00000461120 ARHGEF16Q5VV41 709 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 JAKMIP3Q5VZ66 844 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 BLIDQ8IZY5 108 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 RASGRP4Q8TDF6 673 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 MORC4Q8TE76 937 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 PCDHA6Q9UN73 950 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 PCDHA8Q9Y5H6 950 aa15.78■□□□□ 0.12
CHRD-209ENST00000461120 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
CHRD-209ENST00000461120 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 M0R2N6 131 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 MMP1P03956 469 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 EIF2AK2P19525 551 aaKnown RBP15.77■□□□□ 0.12
CHRD-209ENST00000461120 EDNRBP24530 442 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 CYP2C19P33261 490 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 GUCY1B3Q02153 619 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 MFSD14CQ5VZR4 134 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 MCTP2Q6DN12 878 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 ARMCX2Q7L311 632 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 FBXO18Q8NFZ0 1043 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 IWS1Q96ST2 819 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 PDCD2LQ9BRP1 358 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 ANO3Q9BYT9 981 aa15.77■□□□□ 0.12
CHRD-209ENST00000461120 B4DLN1 442 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 SNAI1O95863 264 aaPredicted RBP15.76■□□□□ 0.11
CHRD-209ENST00000461120 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
CHRD-209ENST00000461120 NR3C2P08235 984 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 KRT2P35908 639 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 TRIM32Q13049 653 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 PGM5Q15124 567 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 IL31RAQ8NI17 732 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 OXER1Q8TDS5 423 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 MPHOSPH6Q99547 160 aaKnown RBP15.76■□□□□ 0.11
CHRD-209ENST00000461120 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.76■□□□□ 0.11
CHRD-209ENST00000461120 HCN4Q9Y3Q4 1203 aa15.76■□□□□ 0.11
CHRD-209ENST00000461120 INHAP05111 366 aa15.75■□□□□ 0.11
CHRD-209ENST00000461120 CACNB2Q08289 660 aaPredicted RBP15.75■□□□□ 0.11
CHRD-209ENST00000461120 PDE4DQ08499 809 aa15.75■□□□□ 0.11
CHRD-209ENST00000461120 LARP1BQ659C4 914 aaKnown RBP15.75■□□□□ 0.11
CHRD-209ENST00000461120 DIS3L2Q8IYB7 885 aaKnown RBP15.75■□□□□ 0.11
CHRD-209ENST00000461120 PAWRQ96IZ0 340 aaKnown RBP15.75■□□□□ 0.11
CHRD-209ENST00000461120 CDX2Q99626 313 aaPredicted RBP15.75■□□□□ 0.11
CHRD-209ENST00000461120 BRMS1Q9HCU9 246 aa15.75■□□□□ 0.11
CHRD-209ENST00000461120 MCM3APO60318 1980 aa15.75■□□□□ 0.11
CHRD-209ENST00000461120 LRRC37A2A6NM11 1700 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 BTBD18B2RXH4 712 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 MYCLP12524 364 aaPredicted RBP15.74■□□□□ 0.11
CHRD-209ENST00000461120 PRKAR2AP13861 404 aaKnown RBP15.74■□□□□ 0.11
CHRD-209ENST00000461120 CCND2P30279 289 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 SREBF1P36956 1147 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 NR5A1Q13285 461 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 SAFBQ15424 915 aaKnown RBP eCLIP15.74■□□□□ 0.11
CHRD-209ENST00000461120 STXBP2Q15833 593 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 PRAMEF19Q5SWL8 479 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 KRT25Q7Z3Z0 450 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 VSIG10LQ86VR7 867 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 SPRYD3Q8NCJ5 442 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 TNFRSF25Q93038 417 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 KATNBL1Q9H079 304 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 ABHD16BQ9H3Z7 469 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 NRBP1Q9UHY1 535 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 CNPY2Q9Y2B0 182 aa15.74■□□□□ 0.11
CHRD-209ENST00000461120 CYBAP13498 195 aa15.73■□□□□ 0.11
CHRD-209ENST00000461120 SYN1P17600 705 aa15.73■□□□□ 0.11
CHRD-209ENST00000461120 PDCP20941 246 aa15.73■□□□□ 0.11
CHRD-209ENST00000461120 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
CHRD-209ENST00000461120 MRPS9P82933 396 aaKnown RBP15.73■□□□□ 0.11
CHRD-209ENST00000461120 ARHGAP4P98171 946 aa15.73■□□□□ 0.11
CHRD-209ENST00000461120 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
CHRD-209ENST00000461120 XRRA1Q6P2D8 792 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms