RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 SMARCA1P28370 1054 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 METAP2P50579 478 aaKnown RBP eCLIP14.49□□□□□ -0.09
HDAC4-207ENST00000461113 GNASQ5JWF2 1037 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 CPLX2Q6PUV4 134 aaKnown RBP14.49□□□□□ -0.09
HDAC4-207ENST00000461113 APOA5Q6Q788 366 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 RASGRP2Q7LDG7 609 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 CCDC144CPQ8IYA2 1237 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 CHST13Q8NET6 341 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 ARNTL2Q8WYA1 636 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 FBXL18Q96ME1 805 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 MYL10Q9BUA6 226 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 RANBP17Q9H2T7 1088 aaKnown RBP14.49□□□□□ -0.09
HDAC4-207ENST00000461113 ZNF214Q9UL59 606 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-207ENST00000461113 SMCHD1A6NHR9 2005 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 LRRC37A2A6NM11 1700 aa14.49□□□□□ -0.09
HDAC4-207ENST00000461113 ADCY6O43306 1168 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 ICAM1P05362 532 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 ALAS1P13196 640 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 NEK4P51957 841 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 GJA9P57773 515 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 AKAP17AQ02040 695 aaKnown RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 APOBRQ0VD83 1088 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 CDC37Q16543 378 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 CSPP1Q1MSJ5 1256 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 RPUSD2Q8IZ73 545 aaKnown RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 GJD3Q8N144 294 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 STAG2Q8N3U4 1231 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 MSL3Q8N5Y2 521 aaKnown RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 REPS2Q8NFH8 660 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 RRP36Q96EU6 259 aaKnown RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 DDX11Q96FC9 970 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 NOC4LQ9BVI4 516 aaKnown RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 BACH2Q9BYV9 841 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 UPF3AQ9H1J1 476 aaKnown RBP14.48□□□□□ -0.09
HDAC4-207ENST00000461113 WNT8AQ9H1J5 351 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 ACAD9Q9H845 621 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 MYH4Q9Y623 1939 aa14.48□□□□□ -0.09
HDAC4-207ENST00000461113 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
HDAC4-207ENST00000461113 CPLX1O14810 134 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 ARHGEF15O94989 841 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 RXRAP19793 462 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 RBM25P49756 843 aaKnown RBP14.47□□□□□ -0.09
HDAC4-207ENST00000461113 SNAP25P60880 206 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 TTLL4Q14679 1199 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 FBXO11Q86XK2 927 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 RAB11FIP4Q86YS3 637 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 ANKRD35Q8N283 1001 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 VWCEQ96DN2 955 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 IL17RAQ96F46 866 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 SCLYQ96I15 445 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 TRERF1Q96PN7 1200 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 AMNQ9BXJ7 453 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 ALDH8A1Q9H2A2 487 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-207ENST00000461113 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 RNF146Q9NTX7 359 aa14.47□□□□□ -0.09
HDAC4-207ENST00000461113 A0A0G2JMZ2 1700 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 ZBTB5O15062 677 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 BEX3Q00994 111 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 GRB10Q13322 594 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 RABEP1Q15276 862 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 HOMER1Q86YM7 354 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 SLC43A3Q8NBI5 491 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 ZNF274Q96GC6 653 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-207ENST00000461113 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 AGXT2Q9BYV1 514 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 TRPV6Q9H1D0 765 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 CPVLQ9H3G5 476 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 RIOX1Q9H6W3 641 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 JMJD4Q9H9V9 463 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 MRPL11Q9Y3B7 192 aaKnown RBP14.46□□□□□ -0.09
HDAC4-207ENST00000461113 TRANK1O15050 2925 aa14.46□□□□□ -0.09
HDAC4-207ENST00000461113 ABCB11O95342 1321 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 PNMA6FA0A0J9YX94 578 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 CTAGE5O15320 804 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 ST18O60284 1047 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 ALADP13716 330 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 SSTR3P32745 418 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-207ENST00000461113 TAP1Q03518 808 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 COL9A3Q14050 684 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-207ENST00000461113 QRICH1Q2TAL8 776 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 USH1GQ495M9 461 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 CXCL17Q6UXB2 119 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 MCF2L2Q86YR7 1114 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 FAM178BQ8IXR5 827 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 PIBF1Q8WXW3 757 aa14.45□□□□□ -0.1
HDAC4-207ENST00000461113 SLKQ9H2G2 1235 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-207ENST00000461113 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-207ENST00000461113 CDKL5O76039 1030 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
HDAC4-207ENST00000461113 ITGA7Q13683 1181 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 TOB2Q14106 344 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-207ENST00000461113 TRIM22Q8IYM9 498 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms