RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SREBF1P36956 1147 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 CLK2P49760 499 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 TOB1P50616 345 aaPredicted RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 HSD17B4P51659 736 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MKRN3Q13064 507 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 GRM1Q13255 1194 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 SEMA3FQ13275 785 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MTMR1Q13613 665 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 PTPAQ15257 358 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 TPD52L1Q16890 204 aaPredicted RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZSCAN23Q3MJ62 389 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 SPRYD7Q5W111 196 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 RESP18Q5W5W9 173 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MOB2Q70IA6 237 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 SV2BQ7L1I2 683 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 RASGRP2Q7LDG7 609 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 DPP9Q86TI2 863 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 CABP7Q86V35 215 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 RIOX2Q8IUF8 465 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 PDILTQ8N807 584 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 SMARCE1Q969G3 411 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MMP19Q99542 508 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 P2RX7Q99572 595 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZNF577Q9BSK1 485 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 TEKT3Q9BXF9 490 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 SPATC1LQ9H0A9 340 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 CSRNP2Q9H175 543 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 CLSTN2Q9H4D0 955 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZFYVE28Q9HCC9 887 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZCCHC17Q9NP64 241 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 TBC1D22BQ9NU19 505 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 ANO10Q9NW15 660 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 LOC285556D6RIA3 1793 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 KIAA1217Q5T5P2 1943 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 SMCHD1A6NHR9 2005 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 CYP3A7-CYP3A51PA0A087WV96 503 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 LOC102724159A0A0B4J2E5 919 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 SPDYE16A6NNV3 312 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 SMTNL1A8MU46 457 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 M0R2N6 131 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 PPP1R11O60927 126 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 NR1I2O75469 434 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 TPM2P07951 284 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 POTEJP0CG39 1038 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 CYP3A7P24462 503 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 YY1P25490 414 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 MAPK4P31152 587 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 CCT6AP40227 531 aaKnown RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 PPP1R2P41236 205 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 MRE11P49959 708 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 NDUFA8P51970 172 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 RPS6P62753 249 aaKnown RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 PLCB2Q00722 1185 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 BAATQ14032 418 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 PWP2Q15269 919 aaKnown RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 TAF1CQ15572 869 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 STX1AQ16623 288 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 Q4G0T1 1027 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 CEP55Q53EZ4 464 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 KIAA1755Q5JYT7 1200 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 TREML2Q5T2D2 321 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 LRCH2Q5VUJ6 765 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 TYW1BQ6NUM6 668 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 LBX2Q6XYB7 198 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 NIPA1Q7RTP0 329 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 ELOA2Q8IYF1 753 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 SHCBP1Q8NEM2 672 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 ANKRD20A12PQ8NF67 263 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 GPT2Q8TD30 523 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 SYMPKQ92797 1274 aaKnown RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 DHX58Q96C10 678 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 HHIPL1Q96JK4 782 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 PGBD1Q96JS3 809 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 CLIC6Q96NY7 704 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 RIT2Q99578 217 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 BEGAINQ9BUH8 593 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 PANK2Q9BZ23 570 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 FTOQ9C0B1 505 aaKnown RBP eCLIP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 CCSER1Q9C0I3 900 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 STK17AQ9UEE5 414 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 FBXO2Q9UK22 296 aaPredicted RBP6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 ADAMTS5Q9UNA0 930 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 DNM3Q9UQ16 869 aa6.56□□□□□ -1.36
RNU1-88P-201ENST00000459274 FAM205CA6NFA0 338 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 IPO5O00410 1097 aaKnown RBP6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 NFIBO00712 420 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 EIF3JO75822 258 aaKnown RBP6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 ITGBL1O95965 494 aaPredicted RBP6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 SSBP05455 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 TPM3P06753 285 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 NR3C2P08235 984 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 BCRP11274 1271 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 ERCC3P19447 782 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 EIF2AK2P19525 551 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms