RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CUL5Q93034 780 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CAVIN3Q969G5 261 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 LRRC45Q96CN5 670 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 SHISA4Q96DD7 197 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 ACSBG1Q96GR2 724 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 DRC1Q96MC2 740 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 OSBPL9Q96SU4 736 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 MTRQ99707 1265 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 DUSP9Q99956 384 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TMEM47Q9BQJ4 181 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 LSM14BQ9BX40 385 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TMEM60Q9H2L4 133 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 FAM207AQ9NSI2 230 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 AGPAT5Q9NUQ2 364 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TFCP2L1Q9NZI6 479 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 ANKIB1Q9P2G1 1089 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 HDAC6Q9UBN7 1215 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRIM10Q9UDY6 481 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PLAGL2Q9UPG8 496 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 COL4A3BPQ9Y5P4 624 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 BZW2Q9Y6E2 419 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 ATP8B3O60423 1300 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 FLT1P17948 1338 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 SPATA31A1Q5TZJ5 1347 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 ATXN2Q99700 1313 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 COL24A1Q17RW2 1714 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 COL16A1Q07092 1604 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 AHDC1Q5TGY3 1603 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PLIN4Q96Q06 1357 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 GOLGA6L10A0A0M3HER8 536 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 GOLGA6L7A0A1B0GV03 622 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 USP17L3A6NCW0 530 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 USP17L4A6NCW7 530 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 LRRC53A6NM62 1247 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SRRM3A6NNA2 597 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 BTNL10A8MVZ5 291 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 HMGB1P1B2RPK0 211 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 H0YHG0 523 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RBAK-RBAKDNI3L0D1 243 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RNF225M0QZC1 329 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRAF5O00463 557 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 NDUFAB1O14561 156 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 CETN3O15182 167 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 EIF3HO15372 352 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 CALUO43852 315 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 FLOT1O75955 427 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PRPF6O94906 941 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 HEXIM1O94992 359 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SYF2O95926 243 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SSBP05455 408 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 HLA-DOAP06340 250 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCDC172P0C7W6 258 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 FCER1AP12319 257 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RASA1P20936 1047 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 ATP2B4P23634 1241 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 HMGB2P26583 209 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PRDX5P30044 214 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 INPP5BP32019 993 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MATR3P43243 847 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 BTDP43251 543 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 TNNI2P48788 182 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 CDK8P49336 464 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PMS1P54277 932 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 HSPA2P54652 639 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SKOR1P84550 965 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 FKBP3Q00688 224 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RASSF7Q02833 373 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 KLHL30Q0D2K2 578 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 STK4Q13043 487 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 COASYQ13057 564 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 GRB10Q13322 594 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 ITPK1Q13572 414 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 GRAPQ13588 217 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 CUL1Q13616 776 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RAPGEF1Q13905 1077 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RPS6KA1Q15418 735 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPP2R5EQ16537 467 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 TMEM119Q4V9L6 283 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MIIPQ5JXC2 388 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 FAM26FQ5R3K3 315 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RC3H1Q5TC82 1133 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPP4R3AQ6IN85 833 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 NFRKBQ6P4R8 1299 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 LRIG3Q6UXM1 1119 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 RUFY4Q6ZNE9 571 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 BARGINQ6ZT62 677 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 DYMQ7RTS9 669 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 USP17L1Q7RTZ2 530 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MAATS1Q7Z4T9 603 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MAPKAPK5Q8IW41 473 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLFN12Q8IYM2 578 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SYCE1Q8N0S2 351 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MICALL1Q8N3F8 863 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 STAG2Q8N3U4 1231 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 MREGQ8N565 214 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 EIF1ADQ8N9N8 165 aaKnown RBP3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 SPATA4Q8NEY3 305 aa3.67□□□□□ -1.82
HMGN1P18-201ENST00000457642 GRAPLQ8TC17 118 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms