RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 EPHB4P54760 987 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 MAPK8IP2Q13387 824 aaPredicted RBP19.61■□□□□ 0.73
PTPN6-204ENST00000456013 CALCRLQ16602 461 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 LRRC55Q6ZSA7 311 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 C16orf86Q6ZW13 317 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 CCDC155Q8N6L0 562 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 PIGSQ96S52 555 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 SH3GL2Q99962 352 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 SSU72P8A0A1W2PR75 194 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 TNFRSF8P28908 595 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 PSMD2Q13200 908 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 GRIK5Q16478 980 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 CCDC181Q5TID7 509 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.61■□□□□ 0.73
PTPN6-204ENST00000456013 ARHGAP27Q6ZUM4 889 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 DYMQ7RTS9 669 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
PTPN6-204ENST00000456013 GOLGA8KD6RF30 607 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 PAFAH1B1P43034 410 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 EHHADHQ08426 723 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 PPFIA1Q13136 1202 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 TMEM266Q2M3C6 531 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 EMBQ6PCB8 327 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 TPTE2Q6XPS3 522 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 RAD54LQ92698 747 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 HINFPQ9BQA5 517 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 RIC8AQ9NPQ8 531 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 TMEM260Q9NX78 707 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 STIM2Q9P246 746 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 SALL4Q9UJQ4 1053 aa19.6■□□□□ 0.73
PTPN6-204ENST00000456013 hCG_1984214I3L0E3 225 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 PDIA5Q14554 519 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 DNAJC21Q5F1R6 531 aaKnown RBP19.59■□□□□ 0.73
PTPN6-204ENST00000456013 SMIM5Q71RC9 77 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 CERS3Q8IU89 383 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 RNF10Q8N5U6 811 aaKnown RBP19.59■□□□□ 0.73
PTPN6-204ENST00000456013 ZNF713Q8N859 430 aaPredicted RBP19.59■□□□□ 0.73
PTPN6-204ENST00000456013 RTFDC1Q9BY42 306 aaPredicted RBP19.59■□□□□ 0.73
PTPN6-204ENST00000456013 LRRC27Q9C0I9 530 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 PLEKHA4Q9H4M7 779 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 VAT1LQ9HCJ6 419 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 GBP6Q6ZN66 633 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 CAVIN3Q969G5 261 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 TSG101Q99816 390 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 TLR10Q9BXR5 811 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 RAB34Q9BZG1 259 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 RIOX1Q9H6W3 641 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 LEMD3Q9Y2U8 911 aa19.59■□□□□ 0.73
PTPN6-204ENST00000456013 RBAK-RBAKDNI3L0D1 243 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 OPA1O60313 960 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 CXCR5P32302 372 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 MATR3P43243 847 aaKnown RBP eCLIP19.58■□□□□ 0.73
PTPN6-204ENST00000456013 IRAK1P51617 712 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 SLC7A5Q01650 507 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 GLE1Q53GS7 698 aaKnown RBP19.58■□□□□ 0.73
PTPN6-204ENST00000456013 KLHDC7AQ5VTJ3 777 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 HGSNATQ68CP4 663 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 CACNA2D4Q7Z3S7 1137 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 PROM2Q8N271 834 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 NOX5Q96PH1 765 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 SRP68Q9UHB9 627 aaKnown RBP19.58■□□□□ 0.73
PTPN6-204ENST00000456013 TSKSQ9UJT2 592 aa19.58■□□□□ 0.73
PTPN6-204ENST00000456013 AHDC1Q5TGY3 1603 aaPredicted RBP19.58■□□□□ 0.73
PTPN6-204ENST00000456013 EPB41P11171 864 aaKnown RBP19.58■□□□□ 0.72
PTPN6-204ENST00000456013 NOVP48745 357 aa19.58■□□□□ 0.72
PTPN6-204ENST00000456013 KCNQ4P56696 695 aa19.58■□□□□ 0.72
PTPN6-204ENST00000456013 GFPT1Q06210 699 aaPredicted RBP19.58■□□□□ 0.72
PTPN6-204ENST00000456013 KCNMA1Q12791 1236 aa19.58■□□□□ 0.72
PTPN6-204ENST00000456013 ALS2CLQ60I27 953 aa19.58■□□□□ 0.72
PTPN6-204ENST00000456013 MTMR8Q96EF0 704 aa19.58■□□□□ 0.72
PTPN6-204ENST00000456013 RNF14Q9UBS8 474 aa19.58■□□□□ 0.72
PTPN6-204ENST00000456013 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 VGLL3A8MV65 326 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 NCK2O43639 380 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 SLC37A4O43826 429 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 EDIL3O43854 480 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 RASSF7Q02833 373 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 DDX12PQ92771 950 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 CEP95Q96GE4 821 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 PSMB7Q99436 277 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 SMARCAL1Q9NZC9 954 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 EHD2Q9NZN4 543 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 TMEM119Q4V9L6 283 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 C8orf74Q6P047 294 aa19.57■□□□□ 0.72
PTPN6-204ENST00000456013 NUCKS1Q9H1E3 243 aaKnown RBP19.57■□□□□ 0.72
PTPN6-204ENST00000456013 TNRC6CQ9HCJ0 1690 aaKnown RBP19.57■□□□□ 0.72
PTPN6-204ENST00000456013 ATAD5Q96QE3 1844 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 POTEMA6NI47 508 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 SLC1A4P43007 532 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 BTDP43251 543 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 ATP2B2Q01814 1243 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 NNTQ13423 1086 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
PTPN6-204ENST00000456013 KRT79Q5XKE5 535 aa19.56■□□□□ 0.72
PTPN6-204ENST00000456013 BARGINQ6ZT62 677 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms