RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 FAM86B1E9PN63 330 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
SCN9A-205ENST00000454569 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 SLC25A27O95847 323 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 FAM86B2P0C5J1 330 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 EIF2AK2P19525 551 aaKnown RBP12.5□□□□□ -0.41
SCN9A-205ENST00000454569 MRPS9P82933 396 aaKnown RBP12.5□□□□□ -0.41
SCN9A-205ENST00000454569 PTGDRQ13258 359 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 ZCCHC17Q9NP64 241 aaKnown RBP12.5□□□□□ -0.41
SCN9A-205ENST00000454569 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
SCN9A-205ENST00000454569 PCDHA7Q9UN72 937 aa12.5□□□□□ -0.41
SCN9A-205ENST00000454569 FRMPD4Q14CM0 1322 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 CENPFP49454 3210 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
SCN9A-205ENST00000454569 CA12O43570 354 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
SCN9A-205ENST00000454569 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
SCN9A-205ENST00000454569 TRAPPC10P48553 1259 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 PGM5Q15124 567 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 STK38Q15208 465 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 AXDND1Q5T1B0 1012 aaPredicted RBP12.49□□□□□ -0.41
SCN9A-205ENST00000454569 TMEM87AQ8NBN3 555 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 SHCBP1Q8NEM2 672 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 LENG9Q96B70 501 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
SCN9A-205ENST00000454569 DNAJC25-GNG10A0A024R161 153 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 IGLV3-22A0A075B6J6 115 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 SPTLC2O15270 562 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 COBLO75128 1261 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 YEATS4O95619 227 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 FAM133AQ8N9E0 248 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
SCN9A-205ENST00000454569 HAS1Q92839 578 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 MBOAT7Q96N66 472 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 MMP19Q99542 508 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 PDCD2LQ9BRP1 358 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 ARHGAP39Q9C0H5 1083 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
SCN9A-205ENST00000454569 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 MAP3K20Q9NYL2 800 aaKnown RBP12.48□□□□□ -0.41
SCN9A-205ENST00000454569 FBXO40Q9UH90 709 aa12.48□□□□□ -0.41
SCN9A-205ENST00000454569 FBXO2Q9UK22 296 aaPredicted RBP12.48□□□□□ -0.41
SCN9A-205ENST00000454569 CYP3A7-CYP3A51PA0A087WV96 503 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 TRPA1O75762 1119 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 CYP3A4P08684 503 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 MYCLP12524 364 aaPredicted RBP12.47□□□□□ -0.41
SCN9A-205ENST00000454569 ITGB5P18084 799 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 CYP3A7P24462 503 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 USP11P51784 963 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 ATP2C1P98194 919 aaPredicted RBP12.47□□□□□ -0.41
SCN9A-205ENST00000454569 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 MROH8Q9H579 483 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 RNF186Q9NXI6 227 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 RGS20O76081 388 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 NR3C2P08235 984 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 ARP10275 920 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 CIITAP33076 1130 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 PRR16Q569H4 304 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 ARHGEF16Q5VV41 709 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 WDR11Q9BZH6 1224 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 GOLPH3LQ9H4A5 285 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 BCAS3Q9H6U6 928 aa12.47□□□□□ -0.41
SCN9A-205ENST00000454569 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
SCN9A-205ENST00000454569 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
SCN9A-205ENST00000454569 ELP1O95163 1332 aa12.46□□□□□ -0.41
SCN9A-205ENST00000454569 POTEB2H3BUK9 544 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 NEMFO60524 1076 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 PPP6R2O75170 966 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 FCER1AP12319 257 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 HSPA6P17066 643 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 PTPREP23469 700 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 ADORA2AP29274 412 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 MAP2K2P36507 400 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 ME1P48163 572 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 ALDH5A1P51649 535 aaPredicted RBP12.46□□□□□ -0.42
SCN9A-205ENST00000454569 CCNA1P78396 465 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 SEMA3FQ13275 785 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 KCTD2Q14681 263 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 ZNF792Q3KQV3 632 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 MCTP2Q6DN12 878 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 SHC4Q6S5L8 630 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.42
SCN9A-205ENST00000454569 UBIAD1Q9Y5Z9 338 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms