RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 DDX41Q9UJV9 622 aaKnown RBP21.36■■□□□ 1.01
TNFRSF25-207ENST00000453260 MRVI1Q9Y6F6 885 aa21.36■■□□□ 1.01
TNFRSF25-207ENST00000453260 GHRHRQ02643 423 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 ARHGAP1Q07960 439 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 LAMC2Q13753 1193 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 GRM4Q14833 912 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 DEFB128Q7Z7B8 93 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 CCDC155Q8N6L0 562 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 COL25A1Q9BXS0 654 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 MYH7BA7E2Y1 1941 aa21.35■■□□□ 1.01
TNFRSF25-207ENST00000453260 E7EWF7 191 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 SGSM2O43147 1006 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 PTGISQ16647 500 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 STOX1Q6ZVD7 989 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 CATIPQ7Z7H3 387 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 HOMER1Q86YM7 354 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 DHX37Q8IY37 1157 aaKnown RBP21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 EMID1Q96A84 441 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 RIOX1Q9H6W3 641 aa21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 TRIP12Q14669 1992 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF25-207ENST00000453260 GCOM1H8Y6P7 765 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 OPLAHO14841 1288 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 IQCF3P0C7M6 154 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 POLR2MP0CAP2 368 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 MYCLP12524 364 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 ATP2A2P16615 1042 aaKnown RBP21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 TMEM67Q5HYA8 995 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 PDCD2LQ9BRP1 358 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 KATNAL1Q9BW62 490 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 FTOQ9C0B1 505 aaKnown RBP eCLIP21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 NKX2-4Q9H2Z4 354 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 PRDM12Q9H4Q4 367 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 PCDHA11Q9Y5I1 949 aa21.33■■□□□ 1.01
TNFRSF25-207ENST00000453260 PNMA6FA0A0J9YX94 578 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 PPP1R11O60927 126 aaPredicted RBP21.32■■□□□ 1
TNFRSF25-207ENST00000453260 VSIG10LQ86VR7 867 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 SESTD1Q86VW0 696 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 PPTC7Q8NI37 304 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 CAGE1Q8TC20 777 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 PPP1R13LQ8WUF5 828 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 MAP4K1Q92918 833 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 PIGSQ96S52 555 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 GBF1Q92538 1859 aa21.32■■□□□ 1
TNFRSF25-207ENST00000453260 CHD9Q3L8U1 2897 aa21.31■■□□□ 1
TNFRSF25-207ENST00000453260 SCN5AQ14524 2016 aa21.31■■□□□ 1
TNFRSF25-207ENST00000453260 TGFB3P10600 412 aa21.31■■□□□ 1
TNFRSF25-207ENST00000453260 HOXA13P31271 388 aaPredicted RBP21.31■■□□□ 1
TNFRSF25-207ENST00000453260 TROAPQ12815 778 aa21.31■■□□□ 1
TNFRSF25-207ENST00000453260 C7orf31Q8N865 590 aa21.31■■□□□ 1
TNFRSF25-207ENST00000453260 SYMPKQ92797 1274 aaKnown RBP21.31■■□□□ 1
TNFRSF25-207ENST00000453260 PPFIA4O75335 1185 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 PARNO95453 639 aaKnown RBP21.3■■□□□ 1
TNFRSF25-207ENST00000453260 CCND2P30279 289 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 RABGGTBP53611 331 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 PGM5Q15124 567 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 CASC1Q6TDU7 716 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 PHOSPHO2Q8TCD6 241 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 AFAP1L1Q8TED9 768 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 KAT2BQ92831 832 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 VWCEQ96DN2 955 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
TNFRSF25-207ENST00000453260 VCANP13611 3396 aa21.3■■□□□ 1
TNFRSF25-207ENST00000453260 IGFBP4P22692 258 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 PSEN2P49810 448 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 PPP2R2DQ66LE6 453 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 GDF6Q6KF10 455 aaPredicted RBP21.29■■□□□ 1
TNFRSF25-207ENST00000453260 FCHSD1Q86WN1 690 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 TMTC2Q8N394 836 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 CTCFLQ8NI51 663 aaPredicted RBP21.29■■□□□ 1
TNFRSF25-207ENST00000453260 IGDCC4Q8TDY8 1250 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 SLC9A7Q96T83 725 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 MAP3K14Q99558 947 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 MTA3Q9BTC8 594 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 SENP2Q9HC62 589 aa21.29■■□□□ 1
TNFRSF25-207ENST00000453260 RBM8AQ9Y5S9 174 aaKnown RBP21.29■■□□□ 1
TNFRSF25-207ENST00000453260 TTC28Q96AY4 2481 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 KIF28PB7ZC32 967 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 KIF5BP33176 963 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 CELF3Q5SZQ8 465 aaKnown RBP21.28■■□□□ 1
TNFRSF25-207ENST00000453260 MYSM1Q5VVJ2 828 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 PPM1EQ8WY54 764 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 SPATA33Q96N06 139 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 ALG1Q9BT22 464 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 GTF2IRD1Q9UHL9 959 aa21.28■■□□□ 1
TNFRSF25-207ENST00000453260 CYTH3O43739 400 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 RGS20O76081 388 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 BAIAP3O94812 1187 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 SELPP16109 830 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 MFSD10Q14728 455 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 KIAA0753Q2KHM9 967 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 GNPTABQ3T906 1256 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 MB21D2Q8IYB1 491 aaPredicted RBP21.27■■□□□ 1
TNFRSF25-207ENST00000453260 LZTS2Q9BRK4 669 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 MLXIPQ9HAP2 919 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 HDAC6Q9UBN7 1215 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 TAF6LQ9Y6J9 622 aa21.27■■□□□ 1
TNFRSF25-207ENST00000453260 TET1Q8NFU7 2136 aa21.26■□□□□ 0.99
TNFRSF25-207ENST00000453260 STAM2O75886 525 aa21.26■□□□□ 0.99
TNFRSF25-207ENST00000453260 GGPS1O95749 300 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms