RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 NOP56O00567 594 aaKnown RBP4.04□□□□□ -1.76
LRCH3-209ENST00000452660 SGSM2O43147 1006 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 SCG5P05408 212 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 ITGA1P56199 1179 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 DPY19L1Q2PZI1 675 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 PKN3Q6P5Z2 889 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 GLB1LQ6UWU2 654 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 TRIM59Q8IWR1 403 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 DPF3Q92784 378 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 LOXL4Q96JB6 756 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 FGD4Q96M96 766 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 NKX2-4Q9H2Z4 354 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 FAM86C1Q9NVL1 165 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 INVSQ9Y283 1065 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 PCDHGB7Q9Y5F8 929 aa4.04□□□□□ -1.76
LRCH3-209ENST00000452660 CYR61O00622 381 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 LAMTOR5O43504 91 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 THBDP07204 575 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 PLS3P13797 630 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 ZNF28P17035 718 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 EPHB4P54760 987 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 RPL11P62913 178 aaKnown RBP4.03□□□□□ -1.76
LRCH3-209ENST00000452660 NKX3-2P78367 333 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 KCNAB2Q13303 367 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 SMAD4Q13485 552 aaKnown RBP4.03□□□□□ -1.76
LRCH3-209ENST00000452660 EMC4Q5J8M3 183 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 ACBD5Q5T8D3 534 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-209ENST00000452660 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 VHLLQ6RSH7 139 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 METTL16Q86W50 562 aaKnown RBP4.03□□□□□ -1.76
LRCH3-209ENST00000452660 CHST13Q8NET6 341 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 NPLOC4Q8TAT6 608 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 MRGPRX3Q96LB0 322 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 C8orf49Q96NF6 230 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 SORCS2Q96PQ0 1159 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 BCAS3Q9H6U6 928 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 RXFP1Q9HBX9 757 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 CLEC1BQ9P126 229 aa4.03□□□□□ -1.76
LRCH3-209ENST00000452660 TIMM13Q9Y5L4 95 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-209ENST00000452660 C22orf46C9J442 243 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 H7BY64 318 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 MYO1BO43795 1136 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 CPP00450 1065 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 CHGBP05060 677 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 HOXC12P31275 282 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 SCRN1Q12765 414 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 C9orf131Q5VYM1 1079 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 GTF2IRD2BQ6EKJ0 949 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 CYP4F22Q6NT55 531 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 KIAA1211LQ6NV74 962 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 CD300LDQ6UXZ3 194 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 CCDC81Q6ZN84 652 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 GTF2IRD2Q86UP8 949 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 DNERQ8NFT8 737 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 PHOSPHO1Q8TCT1 267 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 KISS1RQ969F8 398 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-209ENST00000452660 YTHDC1Q96MU7 727 aaKnown RBP4.02□□□□□ -1.77
LRCH3-209ENST00000452660 TMEM209Q96SK2 561 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 MARCH2Q9P0N8 246 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 PCDHB10Q9UN67 800 aa4.02□□□□□ -1.77
LRCH3-209ENST00000452660 MAFKO60675 156 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 KCNH1O95259 989 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 RECKO95980 971 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 TACR2P21452 398 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 ADAM9Q13443 819 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 CR1LQ2VPA4 569 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 MBLAC2Q68D91 279 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 MILR1Q7Z6M3 343 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 FRS2Q8WU20 508 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 MBD6Q96DN6 1003 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 TOE1Q96GM8 510 aaKnown RBP4.01□□□□□ -1.77
LRCH3-209ENST00000452660 CLIC6Q96NY7 704 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 PDGFDQ9GZP0 370 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-209ENST00000452660 DTLQ9NZJ0 730 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 APEX2Q9UBZ4 518 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 SIT1Q9Y3P8 196 aa4.01□□□□□ -1.77
LRCH3-209ENST00000452660 DDX3XO00571 662 aaKnown RBP eCLIP4□□□□□ -1.77
LRCH3-209ENST00000452660 HGSO14964 777 aaPredicted RBP4□□□□□ -1.77
LRCH3-209ENST00000452660 SUV39H1O43463 412 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 B4GALT3O60512 393 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 TADA3O75528 432 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 GDF5P43026 501 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 PURAQ00577 322 aaKnown RBP4□□□□□ -1.77
LRCH3-209ENST00000452660 SLFN13Q68D06 897 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 MCTP2Q6DN12 878 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 KLHL36Q8N4N3 616 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 SLC16A11Q8NCK7 471 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 TTLL11Q8NHH1 800 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 DIO2Q92813 273 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 TMEM168Q9H0V1 697 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 CD248Q9HCU0 757 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 COA3Q9Y2R0 106 aaPredicted RBP4□□□□□ -1.77
LRCH3-209ENST00000452660 TESMINQ9Y4I5 508 aa4□□□□□ -1.77
LRCH3-209ENST00000452660 ZNF536O15090 1300 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 LTBRP36941 435 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 ACVRL1P37023 503 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 PPP2CBP62714 309 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 PPP2CAP67775 309 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms