RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 ZBTB5O15062 677 aa21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 PPP1R11O60927 126 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 GH1P01241 217 aa21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 CHMP4BP1P59074 171 aa21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 RALYLQ86SE5 291 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 PXMP2Q9NR77 195 aa21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 MSRAQ9UJ68 235 aa21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 PCDHA1Q9Y5I3 950 aa21.36■■□□□ 1.01
PDLIM2-214ENST00000452226 ERICH2A1L162 156 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 NR3C2P08235 984 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 MMP3P08254 477 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 HSD17B4P51659 736 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 ANTXR2P58335 489 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 PTPN11Q06124 597 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 ARHGAP1Q07960 439 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 GRM4Q14833 912 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 RAB30Q15771 203 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 CHST3Q7LGC8 479 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 VWCEQ96DN2 955 aa21.35■■□□□ 1.01
PDLIM2-214ENST00000452226 CHD7Q9P2D1 2997 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 EIF3JO75822 258 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 HOMER1Q86YM7 354 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 IGDCC4Q8TDY8 1250 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 MTA3Q9BTC8 594 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 SENP2Q9HC62 589 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 SLC4A7Q9Y6M7 1214 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 VCANP13611 3396 aa21.34■■□□□ 1.01
PDLIM2-214ENST00000452226 PFKMP08237 780 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 GHRHRQ02643 423 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 WTAPQ15007 396 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 SART3Q15020 963 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 SLC35G1Q2M3R5 365 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 TSGA10IPQ3SY00 556 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 DEFB128Q7Z7B8 93 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 TET1Q8NFU7 2136 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 MAP3K20Q9NYL2 800 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 NOD1Q9Y239 953 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 MRVI1Q9Y6F6 885 aa21.33■■□□□ 1.01
PDLIM2-214ENST00000452226 ZBBXA8MT70 800 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 PITPNM1O00562 1244 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 HOXA13P31271 388 aaPredicted RBP21.32■■□□□ 1
PDLIM2-214ENST00000452226 COL9A3Q14050 684 aaPredicted RBP21.32■■□□□ 1
PDLIM2-214ENST00000452226 TJAP1Q5JTD0 557 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 RETREG2Q8NC44 543 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 PIGSQ96S52 555 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 NKX2-4Q9H2Z4 354 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 PRDM12Q9H4Q4 367 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 RIOX1Q9H6W3 641 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 TANC1Q9C0D5 1861 aa21.32■■□□□ 1
PDLIM2-214ENST00000452226 MYCLP12524 364 aaPredicted RBP21.31■■□□□ 1
PDLIM2-214ENST00000452226 CASTP20810 708 aaKnown RBP21.31■■□□□ 1
PDLIM2-214ENST00000452226 TROAPQ12815 778 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 TRAF1Q13077 416 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 BFSP2Q13515 415 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 PTGISQ16647 500 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 DGKDQ16760 1214 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 TMEM67Q5HYA8 995 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 RNF20Q5VTR2 975 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 SAMD3Q8N6K7 520 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 KAT2BQ92831 832 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 PDCD2LQ9BRP1 358 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 SLC28A3Q9HAS3 691 aa21.31■■□□□ 1
PDLIM2-214ENST00000452226 YBX2Q9Y2T7 364 aaKnown RBP21.31■■□□□ 1
PDLIM2-214ENST00000452226 PNMA6FA0A0J9YX94 578 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 CYTH3O43739 400 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 IQCF3P0C7M6 154 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 ATP2A2P16615 1042 aaKnown RBP21.3■■□□□ 1
PDLIM2-214ENST00000452226 MCM5P33992 734 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 RFC2P35250 354 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 RABGGTBP53611 331 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 LAMC2Q13753 1193 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 CATIPQ7Z7H3 387 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 KCNB2Q92953 911 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 EMID1Q96A84 441 aaPredicted RBP21.3■■□□□ 1
PDLIM2-214ENST00000452226 TTC28Q96AY4 2481 aa21.3■■□□□ 1
PDLIM2-214ENST00000452226 GCOM1H8Y6P7 765 aaPredicted RBP21.29■■□□□ 1
PDLIM2-214ENST00000452226 PRC1O43663 620 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 RGS20O76081 388 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 POLR2MP0CAP2 368 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 PGM5Q15124 567 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 GDF6Q6KF10 455 aaPredicted RBP21.29■■□□□ 1
PDLIM2-214ENST00000452226 VSIG10LQ86VR7 867 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 SESTD1Q86VW0 696 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 DHX37Q8IY37 1157 aaKnown RBP21.29■■□□□ 1
PDLIM2-214ENST00000452226 RASEFQ8IZ41 740 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 USP38Q8NB14 1042 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 PPTC7Q8NI37 304 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 LY9Q9HBG7 655 aa21.29■■□□□ 1
PDLIM2-214ENST00000452226 ACTN1P12814 892 aa21.28■■□□□ 1
PDLIM2-214ENST00000452226 KCNV1Q6PIU1 500 aa21.28■■□□□ 1
PDLIM2-214ENST00000452226 FCHSD1Q86WN1 690 aa21.28■■□□□ 1
PDLIM2-214ENST00000452226 IL31RAQ8NI17 732 aa21.28■■□□□ 1
PDLIM2-214ENST00000452226 TMEM87BQ96K49 555 aa21.28■■□□□ 1
PDLIM2-214ENST00000452226 FTOQ9C0B1 505 aaKnown RBP eCLIP21.28■■□□□ 1
PDLIM2-214ENST00000452226 PCDHA11Q9Y5I1 949 aa21.28■■□□□ 1
PDLIM2-214ENST00000452226 MYOGP15173 224 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 CCND2P30279 289 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 PSEN2P49810 448 aa21.27■■□□□ 1
PDLIM2-214ENST00000452226 CCDC155Q8N6L0 562 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms