RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LIMA1Q9UHB6 759 aaKnown RBP7.45□□□□□ -1.22
USP46-202ENST00000451218 MSH4O15457 936 aa7.45□□□□□ -1.22
USP46-202ENST00000451218 PSMD10O75832 226 aa7.45□□□□□ -1.22
USP46-202ENST00000451218 BMP3P12645 472 aa7.45□□□□□ -1.22
USP46-202ENST00000451218 STAT3P40763 770 aa7.45□□□□□ -1.22
USP46-202ENST00000451218 EPM2AIP1Q7L775 607 aaPredicted RBP7.45□□□□□ -1.22
USP46-202ENST00000451218 C6orf50Q9HD87 102 aa7.45□□□□□ -1.22
USP46-202ENST00000451218 GPRC5DQ9NZD1 345 aa7.45□□□□□ -1.22
USP46-202ENST00000451218 G3V3G9 751 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 RGS20O76081 388 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 SLC1A4P43007 532 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 MUM1L1Q5H9M0 696 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 STRA6Q9BX79 667 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 KIAA1683Q9H0B3 1180 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 PCDHA1Q9Y5I3 950 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 GNA11P29992 359 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 USP11P51784 963 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 MRPS9P82933 396 aaKnown RBP7.44□□□□□ -1.22
USP46-202ENST00000451218 AKAP17AQ02040 695 aaKnown RBP7.44□□□□□ -1.22
USP46-202ENST00000451218 TRIM65Q6PJ69 517 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 PSTPIP2Q9H939 334 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 RWDD2AQ9UIY3 292 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 NFE2L3Q9Y4A8 694 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 RIPK3Q9Y572 518 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 MPHOSPH10O00566 681 aaKnown RBP7.44□□□□□ -1.22
USP46-202ENST00000451218 NOL9Q5SY16 702 aaKnown RBP7.44□□□□□ -1.22
USP46-202ENST00000451218 ZSCAN29Q8IWY8 852 aaPredicted RBP7.44□□□□□ -1.22
USP46-202ENST00000451218 RAD54LQ92698 747 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 CUL5Q93034 780 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 C12orf42Q96LP6 360 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 HSD17B14Q9BPX1 270 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 SLC38A10Q9HBR0 1119 aa7.44□□□□□ -1.22
USP46-202ENST00000451218 STBD1O95210 358 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 GYPCP04921 128 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 ITGB5P18084 799 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 KCNJ6P48051 423 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP46-202ENST00000451218 ARHGAP4P98171 946 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 REXO1L1PQ8IX06 675 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 KCTD10Q9H3F6 313 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 HOXA13P31271 388 aaPredicted RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 GTF2F1P35269 517 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP46-202ENST00000451218 CASP5P51878 434 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 NOLC1Q14978 699 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP46-202ENST00000451218 RBM26Q5T8P6 1007 aaKnown RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 CABP7Q86V35 215 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP46-202ENST00000451218 SLC5A5Q92911 643 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 SMARCE1Q969G3 411 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 PURBQ96QR8 312 aaKnown RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 PLIN2Q99541 437 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 DDX25Q9UHL0 483 aaKnown RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 TRPM7Q96QT4 1865 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 NFIBO00712 420 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 ABL1P00519 1130 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 VCAM1P19320 739 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 EPS15P42566 896 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 AP3B2Q13367 1082 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 SPATA1Q5VX52 437 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 CENPPQ6IPU0 288 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 CATSPER3Q86XQ3 398 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 IQUBQ8NA54 791 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 AGBL1Q96MI9 1066 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 BRMS1Q9HCU9 246 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 IMPACTQ9P2X3 320 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 CNOT7Q9UIV1 285 aaKnown RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 ZNF214Q9UL59 606 aaPredicted RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 MKI67P46013 3256 aaKnown RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 MYO1BO43795 1136 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 PTPRAP18433 802 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 STAT2P52630 851 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 GNL2Q13823 731 aaKnown RBP7.43□□□□□ -1.22
USP46-202ENST00000451218 KIF4BQ2VIQ3 1234 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 OTOP1Q7RTM1 612 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 FGD4Q96M96 766 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 PCDHB8Q9UN66 801 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 AFG3L2Q9Y4W6 797 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 PCDHB13Q9Y5F0 798 aa7.43□□□□□ -1.22
USP46-202ENST00000451218 SYNRGQ9UMZ2 1314 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 MCM6Q14566 821 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 KRT31Q15323 416 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 CALCRLQ16602 461 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 TBC1D10BQ4KMP7 808 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 PRAMEF18Q5VWM3 479 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 SNCAIPQ9Y6H5 919 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 ITIH6Q6UXX5 1313 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 NPHP3-ACAD11A0A0J9YXS1 232 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 ZBTB39O15060 712 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 USP2O75604 605 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 MYL1P05976 194 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 ITGB3BPQ13352 177 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 PPP2R5CQ13362 524 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 HSP90AA4PQ58FG1 418 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 ANKRD40Q6AI12 368 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 KANK3Q6NY19 840 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms