RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 EARS2Q5JPH6 523 aaKnown RBP14.88□□□□□ -0.03
VPS33A-202ENST00000451053 PCNX4Q63HM2 1172 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 MCTP2Q6DN12 878 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 VSIG10LQ86VR7 867 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 ARMC5Q96C12 935 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 ZNF333Q96JL9 665 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 EHMT1Q9H9B1 1298 aa14.88□□□□□ -0.03
VPS33A-202ENST00000451053 CCDC194A0A1B0GVG4 234 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 KIF28PB7ZC32 967 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 RGS20O76081 388 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 ARHGAP4P98171 946 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 SAFBQ15424 915 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS33A-202ENST00000451053 TBCKQ8TEA7 893 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 CRYGNQ8WXF5 182 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 VTA1Q9NP79 307 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 RTEL1Q9NZ71 1219 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 NRBP1Q9UHY1 535 aa14.87□□□□□ -0.03
VPS33A-202ENST00000451053 H3BQV1 296 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 EDIL3O43854 480 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 EIF3JO75822 258 aaKnown RBP14.86□□□□□ -0.03
VPS33A-202ENST00000451053 SYT1P21579 422 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 NONOQ15233 471 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS33A-202ENST00000451053 INF2Q27J81 1249 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 IFFO2Q5TF58 517 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 TAPT1Q6NXT6 567 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 XRRA1Q6P2D8 792 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 SEPT14Q6ZU15 432 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 PIK3AP1Q6ZUJ8 805 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 MYH7BA7E2Y1 1941 aa14.86□□□□□ -0.03
VPS33A-202ENST00000451053 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 VPS37CA5D8V6 355 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 ADCY6O43306 1168 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 CYP3A4P08684 503 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 CCL5P13501 91 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 CNGA1P29973 690 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 ADCYAP1R1P41586 468 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 CCDC144BQ3MJ40 725 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 TMEM63BQ5T3F8 832 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 MCTP1Q6DN14 999 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 LENG1Q96BZ8 264 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 INPP4AQ96PE3 977 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 FOXP1Q9H334 677 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 HMX1Q9NP08 348 aaPredicted RBP14.85□□□□□ -0.03
VPS33A-202ENST00000451053 UBIAD1Q9Y5Z9 338 aa14.85□□□□□ -0.03
VPS33A-202ENST00000451053 RBM47A0AV96 593 aaKnown RBP14.84□□□□□ -0.03
VPS33A-202ENST00000451053 SEPT4O43236 478 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 STX6O43752 255 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 STAM2O75886 525 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 ITGB5P18084 799 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 PTGS1P23219 599 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS33A-202ENST00000451053 GNL2Q13823 731 aaKnown RBP14.84□□□□□ -0.03
VPS33A-202ENST00000451053 ANO1Q5XXA6 986 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 CYP2W1Q8TAV3 490 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 WDR11Q9BZH6 1224 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 RNF208Q9H0X6 261 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 KIAA1217Q5T5P2 1943 aa14.84□□□□□ -0.03
VPS33A-202ENST00000451053 FAM86B1E9PN63 330 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 ARIH2O95376 493 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 FAM86B2P0C5J1 330 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 AKR1A1P14550 325 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 SMPD1P17405 629 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 ZNF76P36508 570 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 SEMA3FQ13275 785 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 CEP55Q53EZ4 464 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 GJC2Q5T442 439 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-202ENST00000451053 NOSTRINQ8IVI9 506 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 SCFD2Q8WU76 684 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 MXRA8Q9BRK3 442 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 PAK6Q9NQU5 681 aaPredicted RBP14.83□□□□□ -0.04
VPS33A-202ENST00000451053 DDX20Q9UHI6 824 aaKnown RBP14.83□□□□□ -0.04
VPS33A-202ENST00000451053 FAM184BQ9ULE4 1060 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 MTMR6Q9Y217 621 aa14.83□□□□□ -0.04
VPS33A-202ENST00000451053 IGLV3-22A0A075B6J6 115 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 WNT7AO00755 349 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 TDP2O95551 362 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 CIITAP33076 1130 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 USP11P51784 963 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 TNFAIP2Q03169 654 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 LETM2Q2VYF4 491 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 GNPTABQ3T906 1256 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 IQSEC1Q6DN90 963 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 CCDC62Q6P9F0 684 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 NEK8Q86SG6 692 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 NLRX1Q86UT6 975 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 FERMT3Q86UX7 667 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 TNS4Q8IZW8 715 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 GPRASP2Q96D09 838 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 JADE2Q9NQC1 790 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 MRVI1Q9Y6F6 885 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 HTTP42858 3142 aa14.82□□□□□ -0.04
VPS33A-202ENST00000451053 SPATA31C2B4DYI2 1134 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 MEIS1O00470 390 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 FIBPO43427 364 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms