RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 MYL10Q9BUA6 226 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 IL23AQ9NPF7 189 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 SEC63Q9UGP8 760 aaKnown RBP20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 DDX41Q9UJV9 622 aaKnown RBP20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 ARHGAP1Q07960 439 aa20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 LAMC2Q13753 1193 aa20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 ZNF365Q70YC5 407 aa20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 FCHSD1Q86WN1 690 aa20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 RPUSD2Q8IZ73 545 aaKnown RBP20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 EMID1Q96A84 441 aaPredicted RBP20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 FAM161BQ96MY7 647 aa20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 MTIF3Q9H2K0 278 aaKnown RBP20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 TRMT13Q9NUP7 481 aaKnown RBP20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
CLTCL1-203ENST00000449918 CDC45O75419 566 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 MMP3P08254 477 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 ACRP10323 421 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 CCND2P30279 289 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 CCL23P55773 120 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 PGM5Q15124 567 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 DGKDQ16760 1214 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 DHX37Q8IY37 1157 aaKnown RBP20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 SEMA6BQ9H3T3 888 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 MYH6P13533 1939 aa20.06■□□□□ 0.8
CLTCL1-203ENST00000449918 TMEM265A0A087WTH1 108 aa20.05■□□□□ 0.8
CLTCL1-203ENST00000449918 FGBP02675 491 aa20.05■□□□□ 0.8
CLTCL1-203ENST00000449918 TGFB3P10600 412 aa20.05■□□□□ 0.8
CLTCL1-203ENST00000449918 CHMP4BP1P59074 171 aa20.05■□□□□ 0.8
CLTCL1-203ENST00000449918 SYNE3Q6ZMZ3 975 aa20.05■□□□□ 0.8
CLTCL1-203ENST00000449918 CUL5Q93034 780 aa20.05■□□□□ 0.8
CLTCL1-203ENST00000449918 UMODL1Q5DID0 1318 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 CYP2C9P11712 490 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 RASIP1Q5U651 963 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 SLC17A8Q8NDX2 589 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 PPTC7Q8NI37 304 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 HERVK_113Q902F9 699 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 GUCD1Q96NT3 240 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 NEK1Q96PY6 1258 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 NOD1Q9Y239 953 aa20.04■□□□□ 0.8
CLTCL1-203ENST00000449918 STAM2O75886 525 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 RGS20O76081 388 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 SGMS1Q86VZ5 419 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 SRBD1Q8N5C6 995 aaKnown RBP20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 FANCBQ8NB91 859 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 RETREG2Q8NC44 543 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 KATNAL1Q9BW62 490 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 LRRC2Q9BYS8 371 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 WNT8AQ9H1J5 351 aa20.03■□□□□ 0.8
CLTCL1-203ENST00000449918 PPFIA4O75335 1185 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 PLEKHA8P1O95397 391 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 PFKMP08237 780 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 RXRAP19793 462 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 BFSP2Q13515 415 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 KRT32Q14532 448 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 TSGA10IPQ3SY00 556 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 GNPTABQ3T906 1256 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 CELF3Q5SZQ8 465 aaKnown RBP20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 SESTD1Q86VW0 696 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 IL31RAQ8NI17 732 aa20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 CDX2Q99626 313 aaPredicted RBP20.02■□□□□ 0.8
CLTCL1-203ENST00000449918 PIK3CDO00329 1044 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 PITPNM1O00562 1244 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 DNAJB2P25686 324 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 COL9A3Q14050 684 aaPredicted RBP20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 PTGISQ16647 500 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 MYSM1Q5VVJ2 828 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 DHX32Q7L7V1 743 aaKnown RBP20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 PPP1R13LQ8WUF5 828 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 KAT2BQ92831 832 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 SCLYQ96I15 445 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 SPATA33Q96N06 139 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 TTYH1Q9H313 450 aaPredicted RBP20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 MLXIPQ9HAP2 919 aa20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 BAZ2BQ9UIF8 2168 aaKnown RBP20.01■□□□□ 0.79
CLTCL1-203ENST00000449918 LAMA2P24043 3122 aaKnown RBP20■□□□□ 0.79
CLTCL1-203ENST00000449918 GGPS1O95749 300 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
CLTCL1-203ENST00000449918 RFC2P35250 354 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 XRRA1Q6P2D8 792 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 OTOP2Q7RTS6 562 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 MICU3Q86XE3 530 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 CMTR1Q8N1G2 835 aaKnown RBP20■□□□□ 0.79
CLTCL1-203ENST00000449918 CCDC155Q8N6L0 562 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 C7orf31Q8N865 590 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 TIFAQ96CG3 184 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 PSTPIP2Q9H939 334 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 SCN10AQ9Y5Y9 1956 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 FRMPD4Q14CM0 1322 aa20■□□□□ 0.79
CLTCL1-203ENST00000449918 PSEN2P49810 448 aa19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 EXOSC10Q01780 885 aaKnown RBP19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 MFSD10Q14728 455 aa19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 USP17L6PQ6QN14 398 aa19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 TMTC3Q6ZXV5 915 aa19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 RAB11FIP4Q86YS3 637 aa19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 CCDC82Q8N4S0 544 aa19.99■□□□□ 0.79
CLTCL1-203ENST00000449918 ZFP91Q96JP5 570 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms