RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PRMT2P55345 433 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 NR5A1Q13285 461 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 KRT40Q6A162 431 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 ESYT2A0FGR8 921 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 ADCY6O43306 1168 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 EDIL3O43854 480 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 CCND3P30281 292 aaPredicted RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 TRAF1Q13077 416 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 TAF3Q5VWG9 929 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 FBXO16Q8IX29 292 aaPredicted RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 KATNBL1Q9H079 304 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PCDHA6Q9UN73 950 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 SMC3Q9UQE7 1217 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PCDHA8Q9Y5H6 950 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PGM5Q15124 567 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 ARHGEF16Q5VV41 709 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 ANO1Q5XXA6 986 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 OLFML2BQ68BL8 750 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 C6orf50Q9HD87 102 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
CCDC171-203ENST00000449575 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
CCDC171-203ENST00000449575 BTBD18B2RXH4 712 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 HMGCRP04035 888 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 MYCLP12524 364 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 EDNRBP24530 442 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 MRPS9P82933 396 aaKnown RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 REXO1Q8N1G1 1221 aaKnown RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 ANO3Q9BYT9 981 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 ZHX1Q9UKY1 873 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 RGS20O76081 388 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 NR3C2P08235 984 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 ZNF467Q7Z7K2 595 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 CCDC12Q8WUD4 166 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 UNC93B1Q9H1C4 597 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 RTEL1Q9NZ71 1219 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
CCDC171-203ENST00000449575 FRMPD4Q14CM0 1322 aa11.23□□□□□ -0.61
CCDC171-203ENST00000449575 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 KIF28PB7ZC32 967 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 MMP1P03956 469 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 ZNF865P0CJ78 1059 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 CYBAP13498 195 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 ZSCAN20P17040 1043 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 GJC2Q5T442 439 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 MAP3K21Q5TCX8 1036 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 FBXO18Q8NFZ0 1043 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 WASF1Q92558 559 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 WNT7AO00755 349 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 GNA11P29992 359 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 NUCB2P80303 420 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 DIS3L2Q8IYB7 885 aaKnown RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 TNFRSF25Q93038 417 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 ZNF333Q96JL9 665 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 PRIMPOLQ96LW4 560 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 SYNGAP1Q96PV0 1343 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 ACVR2BQ13705 512 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 TAPT1Q6NXT6 567 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 MYRIPQ8NFW9 859 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 CRYGNQ8WXF5 182 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 INTS4Q96HW7 963 aaKnown RBP11.22□□□□□ -0.61
CCDC171-203ENST00000449575 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
CCDC171-203ENST00000449575 WDR81Q562E7 1941 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 ASB14A6NK59 587 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 ARIH2O95376 493 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 CNGA1P29973 690 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 PDE4DQ08499 809 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms