RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 POLR2MP0CAP2 368 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 CASTP20810 708 aaKnown RBP12.53□□□□□ -0.4
SRRT-205ENST00000449389 RFC2P35250 354 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 KCNV1Q6PIU1 500 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 CHST3Q7LGC8 479 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRRT-205ENST00000449389 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 SCLYQ96I15 445 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
SRRT-205ENST00000449389 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 NOD1Q9Y239 953 aa12.53□□□□□ -0.4
SRRT-205ENST00000449389 CYTH3O43739 400 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 DDAH1O94760 285 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 MYCLP12524 364 aaPredicted RBP12.52□□□□□ -0.41
SRRT-205ENST00000449389 HOXA13P31271 388 aaPredicted RBP12.52□□□□□ -0.41
SRRT-205ENST00000449389 KIF5BP33176 963 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 PBX2P40425 430 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 BFSP2Q13515 415 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 GRIN2CQ14957 1233 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 PGM5Q15124 567 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 DGKDQ16760 1214 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 VSIG10LQ86VR7 867 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 SESTD1Q86VW0 696 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 RETREG2Q8NC44 543 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 CTCFLQ8NI51 663 aaPredicted RBP12.52□□□□□ -0.41
SRRT-205ENST00000449389 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 CHD9Q3L8U1 2897 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 UNC80Q8N2C7 3258 aa12.52□□□□□ -0.41
SRRT-205ENST00000449389 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 PRC1O43663 620 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 RGS20O76081 388 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 CCND2P30279 289 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 MCM5P33992 734 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 PTGISQ16647 500 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
SRRT-205ENST00000449389 ZNF654Q8IZM8 581 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 PPP1R13LQ8WUF5 828 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 KAT2BQ92831 832 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 VWCEQ96DN2 955 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 LSG1Q9H089 658 aaKnown RBP12.51□□□□□ -0.41
SRRT-205ENST00000449389 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
SRRT-205ENST00000449389 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 SLC27A2O14975 620 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 TGFB3P10600 412 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 ACTN1P12814 892 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 HOXD8P13378 290 aaPredicted RBP12.5□□□□□ -0.41
SRRT-205ENST00000449389 SMARCA1P28370 1054 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 GNAQP50148 359 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 NFXL1Q6ZNB6 911 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 DEFB128Q7Z7B8 93 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 FCHSD1Q86WN1 690 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 IL31RAQ8NI17 732 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 CAGE1Q8TC20 777 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
SRRT-205ENST00000449389 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
SRRT-205ENST00000449389 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
SRRT-205ENST00000449389 FRMPD4Q14CM0 1322 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 SH2B2O14492 632 aaPredicted RBP12.49□□□□□ -0.41
SRRT-205ENST00000449389 PPFIA4O75335 1185 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 STAM2O75886 525 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 GGPS1O95749 300 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 F2P00734 622 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
SRRT-205ENST00000449389 LIFRP42702 1097 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 PSEN2P49810 448 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 MFSD10Q14728 455 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 GNPTABQ3T906 1256 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
SRRT-205ENST00000449389 MYSM1Q5VVJ2 828 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
SRRT-205ENST00000449389 CENPQQ7L2Z9 268 aaPredicted RBP12.49□□□□□ -0.41
SRRT-205ENST00000449389 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 SPATA33Q96N06 139 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 MYL10Q9BUA6 226 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 NKX2-4Q9H2Z4 354 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 SLC28A3Q9HAS3 691 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
SRRT-205ENST00000449389 GTF2IRD1Q9UHL9 959 aa12.49□□□□□ -0.41
SRRT-205ENST00000449389 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms