RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PARP1P09874 1014 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 IQCF3P0C7M6 154 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 IGFBP4P22692 258 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 ADGRE1Q14246 886 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 DEFB128Q7Z7B8 93 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 SYTL5Q8TDW5 730 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 PPM1EQ8WY54 764 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 COPS5Q92905 334 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 JAKMIP1Q96N16 626 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 TAAR1Q96RJ0 339 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 NOD1Q9Y239 953 aa15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 YBX2Q9Y2T7 364 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-213ENST00000448520 MYH6P13533 1939 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 GH1P01241 217 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 CASTP20810 708 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 RABGGTBP53611 331 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 PPP2R2DQ66LE6 453 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 CYB5R4Q7L1T6 521 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 CHST3Q7LGC8 479 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 FBXO11Q86XK2 927 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 TBC1D5Q92609 795 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 RMDN3Q96TC7 470 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 TSPYL2Q9H2G4 693 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 CPVLQ9H3G5 476 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 MAP3K20Q9NYL2 800 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 THEGQ9P2T0 379 aa15.94■□□□□ 0.14
PDLIM2-213ENST00000448520 GBF1Q92538 1859 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 DHX16O60231 1041 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 EIF3JO75822 258 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 ARIH2O95376 493 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 PARNO95453 639 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 MRPS5P82675 430 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 QRICH1Q2TAL8 776 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 TSGA10IPQ3SY00 556 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 ARHGEF16Q5VV41 709 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 SEPT14Q6ZU15 432 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 SESTD1Q86VW0 696 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 CCDC155Q8N6L0 562 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 CAGE1Q8TC20 777 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 AFG1LQ8WV93 481 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 SLC9A7Q96T83 725 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 UBAC1Q9BSL1 405 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 UPF3BQ9BZI7 483 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 FTOQ9C0B1 505 aaKnown RBP eCLIP15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 VAT1LQ9HCJ6 419 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 PRDM6Q9NQX0 595 aa15.93■□□□□ 0.14
PDLIM2-213ENST00000448520 TET1Q8NFU7 2136 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 ANTXR2P58335 489 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 PTGISQ16647 500 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 DGKDQ16760 1214 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 LY6KQ17RY6 165 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 IFIT1BQ5T764 474 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 MB21D2Q8IYB1 491 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 ASB2Q96Q27 587 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 AMNQ9BXJ7 453 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 JMJD4Q9H9V9 463 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 SCN5AQ14524 2016 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 KIAA1217Q5T5P2 1943 aa15.92■□□□□ 0.14
PDLIM2-213ENST00000448520 TNFRSF10AO00220 468 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 BAIAP3O94812 1187 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 NR3C2P08235 984 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 MMP3P08254 477 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 ARHGAP1Q07960 439 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 TRAF1Q13077 416 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 LAMC2Q13753 1193 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 CCDC85BQ15834 202 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 KCNV1Q6PIU1 500 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 RALYLQ86SE5 291 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 NCOA7Q8NI08 942 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 AFAP1L1Q8TED9 768 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 EMID1Q96A84 441 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 LRRC2Q9BYS8 371 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 COL20A1Q9P218 1284 aa15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 DDX41Q9UJV9 622 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-213ENST00000448520 MYH7BA7E2Y1 1941 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 PRRC2BQ5JSZ5 2229 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 KLRF2D3W0D1 207 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 CFBP00751 764 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 MYOGP15173 224 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 POU3F3P20264 500 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 CHMP4BP1P59074 171 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 ANAPC15P60006 121 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 KRT32Q14532 448 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 KATNAL1Q9BW62 490 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 PXMP2Q9NR77 195 aa15.9■□□□□ 0.14
PDLIM2-213ENST00000448520 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 GTPBP6O43824 516 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 PPFIA4O75335 1185 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 HSD17B4P51659 736 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 GHRHRQ02643 423 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 TRDNQ13061 729 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 BLOC1S2Q6QNY1 142 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms