RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 LIFRP42702 1097 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 ANTXR2P58335 489 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 BFSP2Q13515 415 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 TMEM63BQ5T3F8 832 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 SLC17A8Q8NDX2 589 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 AFG1LQ8WV93 481 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 COPS5Q92905 334 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 FAM161BQ96MY7 647 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 IL23AQ9NPF7 189 aa12.66□□□□□ -0.38
NPIPB3-202ENST00000448012 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 STAM2O75886 525 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 PFKMP08237 780 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 TGFB3P10600 412 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 ACTN1P12814 892 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 EPHB4P54760 987 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 CCL23P55773 120 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 GHRHRQ02643 423 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 C7orf31Q8N865 590 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 NEK1Q96PY6 1258 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 TAF6LQ9Y6J9 622 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 MCM3APO60318 1980 aa12.65□□□□□ -0.38
NPIPB3-202ENST00000448012 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 PPP1R11O60927 126 aaPredicted RBP12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 ARIH2O95376 493 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 MMP3P08254 477 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 ACRP10323 421 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 PGM5Q15124 567 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 ZNF365Q70YC5 407 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 TRMT13Q9NUP7 481 aaKnown RBP12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 MSRAQ9UJ68 235 aa12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
NPIPB3-202ENST00000448012 ZBBXA8MT70 800 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 CYTH3O43739 400 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 CYP2C9P11712 490 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 RFC2P35250 354 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 RAB30Q15771 203 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 MICU3Q86XE3 530 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 TIFAQ96CG3 184 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 FTOQ9C0B1 505 aaKnown RBP eCLIP12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 SEMA6BQ9H3T3 888 aa12.63□□□□□ -0.39
NPIPB3-202ENST00000448012 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 OPLAHO14841 1288 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 ZBTB43O43298 467 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 PPFIA4O75335 1185 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 GGPS1O95749 300 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 DNAJB2P25686 324 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 NEDD9Q14511 834 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 PTGISQ16647 500 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 CELF3Q5SZQ8 465 aaKnown RBP12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 XRRA1Q6P2D8 792 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 DHX32Q7L7V1 743 aaKnown RBP12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 OTOP2Q7RTS6 562 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 CCDC82Q8N4S0 544 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 CAGE1Q8TC20 777 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 LRRC2Q9BYS8 371 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
NPIPB3-202ENST00000448012 SPDYE3A6NKU9 549 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 FIBPO43427 364 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 REC8O95072 547 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 FOSL2P15408 326 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 RXRAP19793 462 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 PSEN2P49810 448 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 MFSD10Q14728 455 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 RTN1Q16799 776 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
NPIPB3-202ENST00000448012 SCLYQ96I15 445 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms