RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PRAMEF19Q5SWL8 479 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 FAM133AQ8N9E0 248 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 TAAR1Q96RJ0 339 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 GJB4Q9NTQ9 266 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 NR2E3Q9Y5X4 410 aa13.24□□□□□ -0.29
LINC00408-201ENST00000447784 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
LINC00408-201ENST00000447784 SOWAHBA6NEL2 793 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 DNM1LO00429 736 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 ZNF865P0CJ78 1059 aaPredicted RBP13.23□□□□□ -0.29
LINC00408-201ENST00000447784 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
LINC00408-201ENST00000447784 PDE4DQ08499 809 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
LINC00408-201ENST00000447784 KRT25Q7Z3Z0 450 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 DIS3L2Q8IYB7 885 aaKnown RBP13.23□□□□□ -0.29
LINC00408-201ENST00000447784 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 FGD4Q96M96 766 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 IWS1Q96ST2 819 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 TMEM260Q9NX78 707 aa13.23□□□□□ -0.29
LINC00408-201ENST00000447784 EVI5O60447 810 aa13.22□□□□□ -0.29
LINC00408-201ENST00000447784 SNAI1O95863 264 aaPredicted RBP13.22□□□□□ -0.29
LINC00408-201ENST00000447784 AKR1A1P14550 325 aa13.22□□□□□ -0.29
LINC00408-201ENST00000447784 ALDH5A1P51649 535 aaPredicted RBP13.22□□□□□ -0.29
LINC00408-201ENST00000447784 XRRA1Q6P2D8 792 aa13.22□□□□□ -0.29
LINC00408-201ENST00000447784 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
LINC00408-201ENST00000447784 ABHD16BQ9H3Z7 469 aa13.22□□□□□ -0.29
LINC00408-201ENST00000447784 PXMP2Q9NR77 195 aa13.22□□□□□ -0.29
LINC00408-201ENST00000447784 COL20A1Q9P218 1284 aa13.22□□□□□ -0.29
LINC00408-201ENST00000447784 BTBD18B2RXH4 712 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 H0YGN5 161 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 NR3C2P08235 984 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 RARBP10826 455 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
LINC00408-201ENST00000447784 SYT1P21579 422 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 CCND2P30279 289 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 ZNF76P36508 570 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
LINC00408-201ENST00000447784 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 NONOQ15233 471 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00408-201ENST00000447784 STXBP2Q15833 593 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 RASGRP4Q8TDF6 673 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
LINC00408-201ENST00000447784 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.29
LINC00408-201ENST00000447784 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.29
LINC00408-201ENST00000447784 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
LINC00408-201ENST00000447784 STX6O43752 255 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
LINC00408-201ENST00000447784 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 ANO1Q5XXA6 986 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 PIK3AP1Q6ZUJ8 805 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 PGBD1Q96JS3 809 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 PDCD2LQ9BRP1 358 aa13.2□□□□□ -0.3
LINC00408-201ENST00000447784 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 STAM2O75886 525 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 SREBF1P36956 1147 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 ARHGAP4P98171 946 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 NR5A1Q13285 461 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 PGM5Q15124 567 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 LRRC41Q15345 812 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 NPY5RQ15761 445 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 GNPTABQ3T906 1256 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 RNF180Q86T96 592 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 NAP1L4Q99733 375 aaKnown RBP13.19□□□□□ -0.3
LINC00408-201ENST00000447784 SENP6Q9GZR1 1112 aaPredicted RBP13.19□□□□□ -0.3
LINC00408-201ENST00000447784 KATNBL1Q9H079 304 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
LINC00408-201ENST00000447784 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
LINC00408-201ENST00000447784 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
LINC00408-201ENST00000447784 M0R2N6 131 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 DUSP11O75319 330 aaKnown RBP13.18□□□□□ -0.3
LINC00408-201ENST00000447784 EDNRBP24530 442 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 USP11P51784 963 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 INF2Q27J81 1249 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 GJC2Q5T442 439 aaPredicted RBP13.18□□□□□ -0.3
LINC00408-201ENST00000447784 EEPD1Q7L9B9 569 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 IPO9Q96P70 1041 aaKnown RBP13.18□□□□□ -0.3
LINC00408-201ENST00000447784 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
LINC00408-201ENST00000447784 ASTN1O14525 1302 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 U2AF2P26368 475 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00408-201ENST00000447784 NKX3-2P78367 333 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 LRRC26Q2I0M4 334 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms