RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
LIN54-203ENST00000446851 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
LIN54-203ENST00000446851 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
LIN54-203ENST00000446851 RIC8AQ9NPQ8 531 aa11.67□□□□□ -0.54
LIN54-203ENST00000446851 SAGE1Q9NXZ1 904 aa11.67□□□□□ -0.54
LIN54-203ENST00000446851 DDX60LQ5H9U9 1706 aaKnown RBP11.67□□□□□ -0.54
LIN54-203ENST00000446851 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 CCND3P30281 292 aaPredicted RBP11.66□□□□□ -0.54
LIN54-203ENST00000446851 CDC25AP30304 524 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 MAEAQ7L5Y9 396 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 OR6J1Q8NGC5 347 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 CLEC4DQ8WXI8 215 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 SPATA33Q96N06 139 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
LIN54-203ENST00000446851 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 MMP1P03956 469 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 PPP1R16BQ96T49 567 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 AZI2Q9H6S1 392 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 XPNPEP3Q9NQH7 507 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 CDK5RAP2Q96SN8 1893 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 MYH8P13535 1937 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 ADAMTS3O15072 1205 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 DPF3Q92784 378 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 FAM184BQ9ULE4 1060 aa11.66□□□□□ -0.54
LIN54-203ENST00000446851 VWA3AA6NCI4 1184 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 RCAN1P53805 252 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 CAP1Q01518 475 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 CACNB2Q08289 660 aaPredicted RBP11.65□□□□□ -0.54
LIN54-203ENST00000446851 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 SHCBP1Q8NEM2 672 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 SENP6Q9GZR1 1112 aaPredicted RBP11.65□□□□□ -0.54
LIN54-203ENST00000446851 ABHD16BQ9H3Z7 469 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 FLRT1Q9NZU1 646 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 PTPN22Q9Y2R2 807 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 MYO9BQ13459 2157 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 FBXO46Q6PJ61 603 aaPredicted RBP11.65□□□□□ -0.54
LIN54-203ENST00000446851 SCFD2Q8WU76 684 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 MEIS2O14770 477 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 TECP42680 631 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 CALCRLQ16602 461 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 SNX21Q969T3 373 aa11.65□□□□□ -0.54
LIN54-203ENST00000446851 FUT2Q10981 343 aa11.65□□□□□ -0.55
LIN54-203ENST00000446851 PGM5Q15124 567 aa11.65□□□□□ -0.55
LIN54-203ENST00000446851 TMEM63BQ5T3F8 832 aa11.65□□□□□ -0.55
LIN54-203ENST00000446851 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.55
LIN54-203ENST00000446851 DOCK3Q8IZD9 2030 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 NEMFO60524 1076 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 CCL5P13501 91 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 TMEM266Q2M3C6 531 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 CXCL17Q6UXB2 119 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 REPS2Q8NFH8 660 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 PDE4DIPQ5VU43 2346 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
LIN54-203ENST00000446851 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 PLA2G6O60733 806 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 GRB14Q14449 540 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 TPH2Q8IWU9 490 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 ZNF668Q96K58 619 aaPredicted RBP11.64□□□□□ -0.55
LIN54-203ENST00000446851 ZMYND12Q9H0C1 365 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 TRPM7Q96QT4 1865 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
LIN54-203ENST00000446851 KRT18P05783 430 aaKnown RBP11.64□□□□□ -0.55
LIN54-203ENST00000446851 ARP10275 920 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
LIN54-203ENST00000446851 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
LIN54-203ENST00000446851 IPO5O00410 1097 aaKnown RBP11.63□□□□□ -0.55
LIN54-203ENST00000446851 CLSTN1O94985 981 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 RAD51AP2Q09MP3 1159 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 TRIM50Q86XT4 487 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 METTL13Q8N6R0 699 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 SUGCTQ9HAC7 445 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 KCNH7Q9NS40 1196 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 KIF28PB7ZC32 967 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 hCG_1984214I3L0E3 225 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 AKR1A1P14550 325 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 SMARCA1P28370 1054 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 EARS2Q5JPH6 523 aaKnown RBP11.63□□□□□ -0.55
LIN54-203ENST00000446851 TLK2Q86UE8 772 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 ZNF713Q8N859 430 aaPredicted RBP11.63□□□□□ -0.55
LIN54-203ENST00000446851 NOC3LQ8WTT2 800 aaKnown RBP11.63□□□□□ -0.55
LIN54-203ENST00000446851 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
LIN54-203ENST00000446851 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 EVCP57679 992 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 MIER3Q7Z3K6 550 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 POLD4Q9HCU8 107 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
LIN54-203ENST00000446851 ZNF286BP0CG31 522 aa11.62□□□□□ -0.55
LIN54-203ENST00000446851 UBA7P41226 1012 aa11.62□□□□□ -0.55
LIN54-203ENST00000446851 NOVP48745 357 aa11.62□□□□□ -0.55
LIN54-203ENST00000446851 AP3B2Q13367 1082 aa11.62□□□□□ -0.55
LIN54-203ENST00000446851 RNF180Q86T96 592 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms