RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SMCO2A6NFE2 343 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 DCTN3O75935 186 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 PDE6CP51160 858 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 CYP2J2P51589 502 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 IRX1P78414 480 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 ADCY1Q08828 1119 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 DACT3Q96B18 629 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 PPWD1Q96BP3 646 aaKnown RBP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 UGGT1Q9NYU2 1555 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 RNF34Q969K3 372 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 FTCDO95954 541 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 TECP42680 631 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 YWHAGP61981 247 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 PIP4K2CQ8TBX8 421 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 TGFBRAP1Q8WUH2 860 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 DEUP1Q05D60 604 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 ARHGEF25Q86VW2 580 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 PLA2G4DQ86XP0 818 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 CEP70Q8NHQ1 597 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 TEKT1Q969V4 418 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 EIF2AQ9BY44 585 aaKnown RBP20.22■□□□□ 0.83
SHANK3-203ENST00000445220 ATP8A2Q9NTI2 1148 aa20.22■□□□□ 0.83
SHANK3-203ENST00000445220 MFAP3LO75121 409 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 CHGBP05060 677 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 MMEP08473 750 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 SLFN14P0C7P3 912 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 JADE1Q6IE81 842 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 GALNT17Q6IS24 598 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 P2RX5Q93086 422 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 ZSCAN10Q96SZ4 725 aaPredicted RBP20.21■□□□□ 0.83
SHANK3-203ENST00000445220 CXorf56Q9H5V9 222 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.21■□□□□ 0.83
SHANK3-203ENST00000445220 RWDD2AQ9UIY3 292 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 FAM170AA1A519 330 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 GPC4O75487 556 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 MYO1EQ12965 1108 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 MAN2A1Q16706 1144 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 GNPTABQ3T906 1256 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 USP17L21D6R901 530 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 ATP1A3P13637 1013 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 CDKL2Q92772 493 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 OSBPL5Q9H0X9 879 aaPredicted RBP20.21■□□□□ 0.83
SHANK3-203ENST00000445220 KLC4Q9NSK0 619 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 GARSP41250 739 aaKnown RBP20.21■□□□□ 0.83
SHANK3-203ENST00000445220 RANBP1P43487 201 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 ZNF658Q5TYW1 1059 aaPredicted RBP20.21■□□□□ 0.83
SHANK3-203ENST00000445220 ARHGAP18Q8N392 663 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 TRIML2Q8N7C3 387 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 SUFUQ9UMX1 484 aa20.21■□□□□ 0.83
SHANK3-203ENST00000445220 GMNCA6NCL1 334 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 MESDQ14696 234 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 KCNG1Q9UIX4 513 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 MSH2P43246 934 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 RESTQ13127 1097 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 GDAP1Q8TB36 358 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-203ENST00000445220 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 C10orf76Q5T2E6 689 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 ANAPC5Q9UJX4 755 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 PCDHA13Q9Y5I0 950 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 EIF4A3P38919 411 aaKnown RBP20.2■□□□□ 0.82
SHANK3-203ENST00000445220 YWHAEP62258 255 aaKnown RBP20.2■□□□□ 0.82
SHANK3-203ENST00000445220 BAG5Q9UL15 447 aa20.2■□□□□ 0.82
SHANK3-203ENST00000445220 MED23Q9ULK4 1368 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 CYP4F22Q6NT55 531 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 CMTR1Q8N1G2 835 aaKnown RBP20.19■□□□□ 0.82
SHANK3-203ENST00000445220 SCG2P13521 617 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 ATP2B4P23634 1241 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 FTOQ9C0B1 505 aaKnown RBP eCLIP20.19■□□□□ 0.82
SHANK3-203ENST00000445220 CCDC68Q9H2F9 335 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 CDK12Q9NYV4 1490 aaPredicted RBP20.19■□□□□ 0.82
SHANK3-203ENST00000445220 CFAP73A6NFT4 308 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 COBLO75128 1261 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 DDAH1O94760 285 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 KIF23Q02241 960 aaPredicted RBP20.19■□□□□ 0.82
SHANK3-203ENST00000445220 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 SMYD4Q8IYR2 804 aaPredicted RBP20.19■□□□□ 0.82
SHANK3-203ENST00000445220 SPAG7O75391 227 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 INPP1P49441 399 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 GRAMD1BQ3KR37 738 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 NEK8Q86SG6 692 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 EEF2KMTQ96G04 330 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 SCYL1Q96KG9 808 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 CCDC138Q96M89 665 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 ANLNQ9NQW6 1124 aa20.19■□□□□ 0.82
SHANK3-203ENST00000445220 BIN2Q9UBW5 565 aaPredicted RBP20.19■□□□□ 0.82
SHANK3-203ENST00000445220 FGAP02671 866 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 TNNI1P19237 187 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 EEF1DP29692 281 aaKnown RBP20.18■□□□□ 0.82
SHANK3-203ENST00000445220 TRAPPC10P48553 1259 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 SGO2Q562F6 1265 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 RASSF10A6NK89 507 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 CCDC188H7C350 402 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 ZBED4O75132 1171 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms