RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 SGSM2O43147 1006 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 TGFB3P10600 412 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 LY6KQ17RY6 165 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 AFG1LQ8WV93 481 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 SCLYQ96I15 445 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 MAP3K14Q99558 947 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 CUL9Q8IWT3 2517 aa18.95■□□□□ 0.62
CTDSP1-204ENST00000443891 OPLAHO14841 1288 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 IQCF3P0C7M6 154 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 TROAPQ12815 778 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 WTAPQ15007 396 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 PPTC7Q8NI37 304 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 AFAP1L1Q8TED9 768 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 VWCEQ96DN2 955 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 SLC9A7Q96T83 725 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 PDCD2LQ9BRP1 358 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 MRVI1Q9Y6F6 885 aa18.94■□□□□ 0.62
CTDSP1-204ENST00000443891 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 E7EWF7 191 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 GCOM1H8Y6P7 765 aaPredicted RBP18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 PPFIA4O75335 1185 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 BAIAP3O94812 1187 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 POLR2MP0CAP2 368 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 HOXD8P13378 290 aaPredicted RBP18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 ATP2A2P16615 1042 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 SMARCA1P28370 1054 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 PTH1RQ03431 593 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 RBL2Q08999 1139 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 PTGISQ16647 500 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 VSIG10LQ86VR7 867 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 MAP4K1Q92918 833 aa18.93■□□□□ 0.62
CTDSP1-204ENST00000443891 ZBBXA8MT70 800 aa18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 STAM2O75886 525 aa18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 CATIPQ7Z7H3 387 aa18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 DHX37Q8IY37 1157 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 TMTC2Q8N394 836 aa18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 KAT2BQ92831 832 aa18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 NKX2-4Q9H2Z4 354 aa18.92■□□□□ 0.62
CTDSP1-204ENST00000443891 PPP1R11O60927 126 aaPredicted RBP18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 F2P00734 622 aa18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 CCND2P30279 289 aa18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 PGM5Q15124 567 aa18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 C7orf31Q8N865 590 aa18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 GTF2IRD1Q9UHL9 959 aa18.91■□□□□ 0.62
CTDSP1-204ENST00000443891 KIF28PB7ZC32 967 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 HAS3O00219 553 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 SELPP16109 830 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 KIF5BP33176 963 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 TMEM67Q5HYA8 995 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 MYSM1Q5VVJ2 828 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 PPP2R2DQ66LE6 453 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 CHST3Q7LGC8 479 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 DEFB128Q7Z7B8 93 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 HOMER1Q86YM7 354 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 PIGSQ96S52 555 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 LZTS2Q9BRK4 669 aa18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 YBX2Q9Y2T7 364 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-204ENST00000443891 DDAH1O94760 285 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 PSEN2P49810 448 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 GNAQP50148 359 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 PTK7Q13308 1070 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 GNPTABQ3T906 1256 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 CELF3Q5SZQ8 465 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 GDF6Q6KF10 455 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 ATXN2LQ8WWM7 1075 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 SPZ1Q9BXG8 430 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 FTOQ9C0B1 505 aaKnown RBP eCLIP18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 CDH23Q9H251 3354 aa18.89■□□□□ 0.61
CTDSP1-204ENST00000443891 KIAA1217Q5T5P2 1943 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 UNC80Q8N2C7 3258 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 CYTH3O43739 400 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 EFCAB14O75071 495 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 RGS20O76081 388 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 MFSD10Q14728 455 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 TJAP1Q5JTD0 557 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 XRRA1Q6P2D8 792 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 CASC1Q6TDU7 716 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 CTCFLQ8NI51 663 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 FRMPD4Q14CM0 1322 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 MYH6P13533 1939 aa18.88■□□□□ 0.61
CTDSP1-204ENST00000443891 CXCL10P02778 98 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 POU3F3P20264 500 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 ICAM3P32942 547 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 RABGGTBP53611 331 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 KIAA0753Q2KHM9 967 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 SLC35G1Q2M3R5 365 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 LRRC8DQ7L1W4 858 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 TMEM87BQ96K49 555 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 SPATA33Q96N06 139 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 CTAGE1Q96RT6 745 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 HDAC6Q9UBN7 1215 aa18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-204ENST00000443891 GGPS1O95749 300 aa18.86■□□□□ 0.61
CTDSP1-204ENST00000443891 MCM5P33992 734 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms