RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 DCP1AQ9NPI6 582 aaPredicted RBP9.92□□□□□ -0.82
LDB2-202ENST00000441778 BCL9O00512 1426 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 TSPY2A6NKD2 308 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 LAD1O00515 517 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 CYTH3O43739 400 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 FTCDO95954 541 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 IL6STP40189 918 aaPredicted RBP9.91□□□□□ -0.82
LDB2-202ENST00000441778 MDH1P40925 334 aaKnown RBP9.91□□□□□ -0.82
LDB2-202ENST00000441778 ITGB3BPQ13352 177 aaPredicted RBP9.91□□□□□ -0.82
LDB2-202ENST00000441778 MAN2A1Q16706 1144 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 COBLL1Q53SF7 1204 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 CNNM4Q6P4Q7 775 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 HEATR3Q7Z4Q2 680 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 DAGLBQ8NCG7 672 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 MMTAG2Q9BU76 263 aaKnown RBP9.91□□□□□ -0.82
LDB2-202ENST00000441778 VCPKMTQ9H867 229 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 CD248Q9HCU0 757 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 STXBP3O00186 592 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 PALMO75781 387 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 OR52Z1P0C646 297 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 PPP1R2P41236 205 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 DDR1Q08345 913 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 PNMA1Q8ND90 353 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 INPP4AQ96PE3 977 aaPredicted RBP9.91□□□□□ -0.82
LDB2-202ENST00000441778 IL17RBQ9NRM6 502 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 TCP11L1Q9NUJ3 509 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 MAD2L2Q9UI95 211 aa9.91□□□□□ -0.82
LDB2-202ENST00000441778 PACSIN2Q9UNF0 486 aaPredicted RBP9.91□□□□□ -0.82
LDB2-202ENST00000441778 SSU72P8A0A1W2PR75 194 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 RBAK-RBAKDNI3L0D1 243 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 RAD51CO43502 376 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 TLR2O60603 784 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 CLSTN1O94985 981 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 PPARDQ03181 441 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 ACTN3Q08043 901 aaPredicted RBP9.9□□□□□ -0.82
LDB2-202ENST00000441778 KCNMA1Q12791 1236 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 TDRD12Q587J7 1177 aaKnown RBP9.9□□□□□ -0.82
LDB2-202ENST00000441778 RNF187Q5TA31 235 aaPredicted RBP9.9□□□□□ -0.82
LDB2-202ENST00000441778 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 MICALCLQ6ZW33 695 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 CCDC13Q8IYE1 715 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 RNF10Q8N5U6 811 aaKnown RBP9.9□□□□□ -0.82
LDB2-202ENST00000441778 NSUN4Q96CB9 384 aaKnown RBP9.9□□□□□ -0.82
LDB2-202ENST00000441778 AK8Q96MA6 479 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 JPH2Q9BR39 696 aaPredicted RBP9.9□□□□□ -0.82
LDB2-202ENST00000441778 TSKSQ9UJT2 592 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 PLAAQ9Y263 795 aa9.9□□□□□ -0.82
LDB2-202ENST00000441778 MYMKA6NI61 221 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 E7EVH7 732 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 CCNT1O60563 726 aaKnown RBP9.9□□□□□ -0.83
LDB2-202ENST00000441778 FAM107AO95990 144 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 TECP42680 631 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 RNASE9P60153 205 aaKnown RBP9.9□□□□□ -0.83
LDB2-202ENST00000441778 MECOMQ03112 1051 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 IFT88Q13099 833 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 GRM4Q14833 912 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 CEP85LQ5SZL2 805 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 C6orf89Q6UWU4 347 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 CCDC84Q86UT8 332 aaPredicted RBP9.9□□□□□ -0.83
LDB2-202ENST00000441778 GLIS3Q8NEA6 775 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 ZKSCAN4Q969J2 545 aaPredicted RBP9.9□□□□□ -0.83
LDB2-202ENST00000441778 NLRC4Q9NPP4 1024 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 A1CFQ9NQ94 594 aaKnown RBP9.9□□□□□ -0.83
LDB2-202ENST00000441778 BARHL2Q9NY43 387 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 RNF14Q9UBS8 474 aa9.9□□□□□ -0.83
LDB2-202ENST00000441778 MAST2Q6P0Q8 1798 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 ATAD5Q96QE3 1844 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 NTSR2O95665 410 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 MYBP10242 640 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 KLRC1P26715 233 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 ECHS1P30084 290 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 HPDP32754 393 aaPredicted RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 HSPA9P38646 679 aaKnown RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 SPRED3Q2MJR0 410 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 LETM2Q2VYF4 491 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 MEI1Q5TIA1 1274 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 CACNA2D4Q7Z3S7 1137 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 MAATS1Q7Z4T9 603 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 C1orf131Q8NDD1 294 aaKnown RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 TMBIM4Q9HC24 238 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 BLOC1S4Q9NUP1 217 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 MTMR7Q9Y216 660 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 ABCB11O95342 1321 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 GRID2IPA4D2P6 1211 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 RASSF9O75901 435 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 NOL4O94818 638 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 ADAMTS2O95450 1211 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 EVA1CP58658 441 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 ERVK-9P63128 1117 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 SETQ01105 290 aaPredicted RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 TFAP4Q01664 338 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 GRB10Q13322 594 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 NAB2Q15742 525 aa9.89□□□□□ -0.83
LDB2-202ENST00000441778 UAP1Q16222 522 aaPredicted RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 CDC37Q16543 378 aaPredicted RBP9.89□□□□□ -0.83
LDB2-202ENST00000441778 TMED8Q6PL24 325 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms