RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KCTD16Q68DU8 428 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 C6orf89Q6UWU4 347 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 NLRP14Q86W24 1093 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 ACTR5Q9H9F9 607 aaPredicted RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 SLC40A1Q9NP59 571 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 AGPAT5Q9NUQ2 364 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 HYOU1Q9Y4L1 999 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 TNKSO95271 1327 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 CCDC189A1A4V9 331 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 PPEF1O14829 653 aaPredicted RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 FAM107AO95990 144 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 KRT14P02533 472 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 NR1D1P20393 614 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 SPA17Q15506 151 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 ZNF174Q15697 407 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 CEP85LQ5SZL2 805 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 MREGQ8N565 214 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 MAGEC3Q8TD91 643 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 CYP2D6P10635 497 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
LTBR-203ENST00000441074 CDR1P51861 262 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 SATB1Q01826 763 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 IFT20Q8IY31 132 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 N4BP2L2Q92802 583 aaPredicted RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 MAGEC2Q9UBF1 373 aaPredicted RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 LRWD1Q9UFC0 647 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 WNT7AO00755 349 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 BBOX1O75936 387 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 SCP2P22307 547 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 IFT88Q13099 833 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 PTGDRQ13258 359 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 CCDC181Q5TID7 509 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
LTBR-203ENST00000441074 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
LTBR-203ENST00000441074 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 GOLGA6L7A0A1B0GV03 622 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
LTBR-203ENST00000441074 ZNF263O14978 683 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 GCFC2P16383 781 aaKnown RBP13.15□□□□□ -0.3
LTBR-203ENST00000441074 MRPS25P82663 173 aaKnown RBP13.15□□□□□ -0.3
LTBR-203ENST00000441074 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
LTBR-203ENST00000441074 PKN1Q16512 942 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 C3orf20Q8ND61 904 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 ATP6V1G3Q96LB4 118 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 CAPN6Q9Y6Q1 641 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.3
LTBR-203ENST00000441074 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 HMGB1P1B2RPK0 211 aaPredicted RBP13.14□□□□□ -0.31
LTBR-203ENST00000441074 B4DLN1 442 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 USP17L21D6R901 530 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 DDAH1O94760 285 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 SEC24CP53992 1094 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 FUT2Q10981 343 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 PAK2Q13177 524 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 SNCBQ16143 134 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 NFRKBQ6P4R8 1299 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 CCDC155Q8N6L0 562 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
LTBR-203ENST00000441074 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms