RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CRISPLD2Q9H0B8 497 aa18.5■□□□□ 0.55
SNRPB-202ENST00000438552 TFRCP02786 760 aaKnown RBP18.49■□□□□ 0.55
SNRPB-202ENST00000438552 RARBP10826 455 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 XBP1P17861 261 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 MRPS9P82933 396 aaKnown RBP18.49■□□□□ 0.55
SNRPB-202ENST00000438552 GJC2Q5T442 439 aaPredicted RBP18.49■□□□□ 0.55
SNRPB-202ENST00000438552 PCNX4Q63HM2 1172 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 SEPT14Q6ZU15 432 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 VSIG10LQ86VR7 867 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 BICD2Q8TD16 824 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 EHMT1Q9H9B1 1298 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 XPNPEP3Q9NQH7 507 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 OGDHLQ9ULD0 1010 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 PCDHA4Q9UN74 947 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
SNRPB-202ENST00000438552 RBM47A0AV96 593 aaKnown RBP18.48■□□□□ 0.55
SNRPB-202ENST00000438552 EIF3JO75822 258 aaKnown RBP18.48■□□□□ 0.55
SNRPB-202ENST00000438552 RGS20O76081 388 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 ARIH2O95376 493 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 FOSP01100 380 aaPredicted RBP18.48■□□□□ 0.55
SNRPB-202ENST00000438552 SMPD1P17405 629 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 HMGN5P82970 282 aaKnown RBP18.48■□□□□ 0.55
SNRPB-202ENST00000438552 TNFAIP2Q03169 654 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 BLIDQ8IZY5 108 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 FAM177A1Q8N128 213 aaPredicted RBP18.48■□□□□ 0.55
SNRPB-202ENST00000438552 DAGLBQ8NCG7 672 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 SCFD2Q8WU76 684 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 WDR11Q9BZH6 1224 aa18.48■□□□□ 0.55
SNRPB-202ENST00000438552 PGK1P00558 417 aa18.47■□□□□ 0.55
SNRPB-202ENST00000438552 MYCNP04198 464 aaPredicted RBP18.47■□□□□ 0.55
SNRPB-202ENST00000438552 SREBF1P36956 1147 aa18.47■□□□□ 0.55
SNRPB-202ENST00000438552 RTEL1Q9NZ71 1219 aa18.47■□□□□ 0.55
SNRPB-202ENST00000438552 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
SNRPB-202ENST00000438552 M0R2N6 131 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 DUSP11O75319 330 aaKnown RBP18.46■□□□□ 0.55
SNRPB-202ENST00000438552 IRX5P78411 483 aaPredicted RBP18.46■□□□□ 0.55
SNRPB-202ENST00000438552 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 IQSEC1Q6DN90 963 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 FAM184AQ8NB25 1140 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 DIS3LQ8TF46 1054 aaKnown RBP18.46■□□□□ 0.55
SNRPB-202ENST00000438552 COPS5Q92905 334 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 INPP4AQ96PE3 977 aaPredicted RBP18.46■□□□□ 0.55
SNRPB-202ENST00000438552 GNEQ9Y223 722 aaKnown RBP18.46■□□□□ 0.55
SNRPB-202ENST00000438552 MRVI1Q9Y6F6 885 aa18.46■□□□□ 0.55
SNRPB-202ENST00000438552 MYADML2A6NDP7 307 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 FARP2O94887 1054 aaPredicted RBP18.45■□□□□ 0.54
SNRPB-202ENST00000438552 TXNP10599 105 aaKnown RBP18.45■□□□□ 0.54
SNRPB-202ENST00000438552 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 TRIM29Q14134 588 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 TTLL4Q14679 1199 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 LRRC41Q15345 812 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 LY6KQ17RY6 165 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 DUSP28Q4G0W2 176 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 KRT40Q6A162 431 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 MCTP2Q6DN12 878 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 GALNT17Q6IS24 598 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 XRRA1Q6P2D8 792 aa18.45■□□□□ 0.54
SNRPB-202ENST00000438552 MKI67P46013 3256 aaKnown RBP18.44■□□□□ 0.54
SNRPB-202ENST00000438552 STAM2O75886 525 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 MMP1P03956 469 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 C6orf222P0C671 652 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-202ENST00000438552 ITGB5P18084 799 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-202ENST00000438552 SEMA3FQ13275 785 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 CUL4AQ13619 759 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 GNPTABQ3T906 1256 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 CCDC62Q6P9F0 684 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 SNX21Q969T3 373 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 C8orf76Q96K31 380 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
SNRPB-202ENST00000438552 ALPK3Q96L96 1907 aa18.44■□□□□ 0.54
SNRPB-202ENST00000438552 SORBS3O60504 671 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 GJB2P29033 226 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 KRT2P35908 639 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 GJA9P57773 515 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 NR5A1Q13285 461 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 ANKLE1Q8NAG6 615 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 OR6J1Q8NGC5 347 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 CRYGNQ8WXF5 182 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 SMC3Q9UQE7 1217 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 UBIAD1Q9Y5Z9 338 aa18.43■□□□□ 0.54
SNRPB-202ENST00000438552 KBTBD13C9JR72 458 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 DNM1LO00429 736 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 CTAGE5O15320 804 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 DYNC1LI2O43237 492 aaPredicted RBP18.42■□□□□ 0.54
SNRPB-202ENST00000438552 FIBPO43427 364 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 UBA1P22314 1058 aaKnown RBP18.42■□□□□ 0.54
SNRPB-202ENST00000438552 BEX3Q00994 111 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 MLLT1Q03111 559 aaPredicted RBP18.42■□□□□ 0.54
SNRPB-202ENST00000438552 KRT25Q7Z3Z0 450 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 RNF180Q86T96 592 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 NLRX1Q86UT6 975 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 DIS3L2Q8IYB7 885 aaKnown RBP18.42■□□□□ 0.54
SNRPB-202ENST00000438552 ARRDC4Q8NCT1 418 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 CYP2W1Q8TAV3 490 aa18.42■□□□□ 0.54
SNRPB-202ENST00000438552 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms