RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 CERS3Q8IU89 383 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 HNRNPLLQ8WVV9 542 aaKnown RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 EIF3CQ99613 913 aaKnown RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 USP14P54578 494 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 RNASE9P60153 205 aaKnown RBP18.56■□□□□ 0.56
TTC3-209ENST00000438055 RASSF7Q02833 373 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 CUL5Q93034 780 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 STK17AQ9UEE5 414 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 POLLQ9UGP5 575 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 SERPINB13Q9UIV8 391 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 KIAA1024Q9UPX6 916 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 PCDHA13Q9Y5I0 950 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 EPHB6O15197 1021 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 PAFAH1B1P43034 410 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 TSGA10Q9BZW7 698 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 BLOC1S4Q9NUP1 217 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 SMARCAL1Q9NZC9 954 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 LRRIQ3A6PVS8 624 aaPredicted RBP18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L15C9J2P7 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L13C9JLJ4 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L11C9JVI0 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L18D6R9N7 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L22D6RA61 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L17D6RBQ6 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L19D6RCP7 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L20D6RJB6 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 MAP2K7O14733 419 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L24Q0WX57 530 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 ASPRV1Q53RT3 343 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 FAM26FQ5R3K3 315 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 TRIM58Q8NG06 486 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 TBC1D16Q8TBP0 767 aa18.56■□□□□ 0.56
TTC3-209ENST00000438055 USP17L10C9JJH3 530 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 CACNB3P54284 484 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 KCNK18Q7Z418 384 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 ADGRF4Q8IZF3 695 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 RAD54LQ92698 747 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 LRRC27Q9C0I9 530 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 PANK4Q9NVE7 773 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 RHBDL3P58872 404 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 MIIPQ5JXC2 388 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 EXOC4Q96A65 974 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 ROBO1Q9Y6N7 1651 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 E9PMD0 336 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 TTLL1O95922 423 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
TTC3-209ENST00000438055 RIN2Q8WYP3 895 aaPredicted RBP18.55■□□□□ 0.56
TTC3-209ENST00000438055 PNMA5Q96PV4 448 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 RUFY1Q96T51 708 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 FAM204AQ9H8W3 233 aa18.55■□□□□ 0.56
TTC3-209ENST00000438055 NCK2O43639 380 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 NT5C2P49902 561 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 POLR2FP61218 127 aaKnown RBP18.54■□□□□ 0.56
TTC3-209ENST00000438055 SLC7A5Q01650 507 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 GFPT1Q06210 699 aaPredicted RBP18.54■□□□□ 0.56
TTC3-209ENST00000438055 VPS72Q15906 364 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 CAPN6Q9Y6Q1 641 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 POLD4Q9HCU8 107 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 FAM170AA1A519 330 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 SNAP25P60880 206 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 MEA1Q16626 185 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 NFRKBQ6P4R8 1299 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 SND1Q7KZF4 910 aaKnown RBP eCLIP18.54■□□□□ 0.561e-6■□□□□ 8.4
TTC3-209ENST00000438055 TMC4Q7Z404 712 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 GPBP1Q86WP2 473 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 ERGIC2Q96RQ1 377 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 LSM14BQ9BX40 385 aaKnown RBP18.54■□□□□ 0.56
TTC3-209ENST00000438055 ARHGAP20Q9P2F6 1191 aa18.54■□□□□ 0.56
TTC3-209ENST00000438055 CENPPQ6IPU0 288 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 GUF1Q8N442 669 aaKnown RBP18.53■□□□□ 0.56
TTC3-209ENST00000438055 EHD2Q9NZN4 543 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.53■□□□□ 0.56
TTC3-209ENST00000438055 PNMA6FA0A0J9YX94 578 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 PVALEFA0A1B0GWK0 134 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 RNF40O75150 1001 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 SLC1A4P43007 532 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 PTPROQ16827 1216 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 JMJD4Q9H9V9 463 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 NPHP3-ACAD11A0A0J9YXS1 232 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 PDE2AO00408 941 aaPredicted RBP18.53■□□□□ 0.56
TTC3-209ENST00000438055 USH1GQ495M9 461 aa18.53■□□□□ 0.56
TTC3-209ENST00000438055 RASSF10A6NK89 507 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 BBOX1O75936 387 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 COASYQ13057 564 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 DNAJC21Q5F1R6 531 aaKnown RBP18.52■□□□□ 0.56
TTC3-209ENST00000438055 CCDC65Q8IXS2 484 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 COG1Q8WTW3 980 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 RIOX1Q9H6W3 641 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 JRKLQ9Y4A0 524 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 PCDHA1Q9Y5I3 950 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 POTEB3A0JP26 581 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 POTECB2RU33 542 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 FKBP3Q00688 224 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms