RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RPS6P62753 249 aaKnown RBP9.07□□□□□ -0.96
VPS50-203ENST00000436177 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 IMMTQ16891 758 aaKnown RBP9.07□□□□□ -0.96
VPS50-203ENST00000436177 TAPT1Q6NXT6 567 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 OTOP2Q7RTS6 562 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 CHD1LQ86WJ1 897 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 SLC43A3Q8NBI5 491 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 PNMA1Q8ND90 353 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 DNERQ8NFT8 737 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 MORC4Q8TE76 937 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 HERVK_113Q902F9 699 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
VPS50-203ENST00000436177 NOC4LQ9BVI4 516 aaKnown RBP9.07□□□□□ -0.96
VPS50-203ENST00000436177 PBX4Q9BYU1 374 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 ALDH8A1Q9H2A2 487 aaPredicted RBP9.07□□□□□ -0.96
VPS50-203ENST00000436177 CTNNA3Q9UI47 895 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 SLC4A7Q9Y6M7 1214 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 TNKSO95271 1327 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 NEDD4P46934 1319 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 GRXCR1A8MXD5 290 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 B4GALT4O60513 344 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 KDM4AO75164 1064 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 GOLGA8HP0CJ92 632 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 TXNP10599 105 aaKnown RBP9.06□□□□□ -0.96
VPS50-203ENST00000436177 ACTN1P12814 892 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 IGFBP4P22692 258 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 PTGS1P23219 599 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 CDC37Q16543 378 aaPredicted RBP9.06□□□□□ -0.96
VPS50-203ENST00000436177 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 ASPRV1Q53RT3 343 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 PPP2R2DQ66LE6 453 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 CWC27Q6UX04 472 aaKnown RBP9.06□□□□□ -0.96
VPS50-203ENST00000436177 DGKHQ86XP1 1220 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 MCF2L2Q86YR7 1114 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 CLEC4DQ8WXI8 215 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 ZKSCAN3Q9BRR0 538 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 KRT23Q9C075 422 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 PRDM12Q9H4Q4 367 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 CNNM2Q9H8M5 875 aa9.06□□□□□ -0.96
VPS50-203ENST00000436177 ABCB11O95342 1321 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 MCM3APO60318 1980 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 PARP1P09874 1014 aaKnown RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 SNHG28P0DPA3 235 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 CYP2C9P11712 490 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 ATP2A2P16615 1042 aaKnown RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 PURAQ00577 322 aaKnown RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 TRDNQ13061 729 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 BFSP2Q13515 415 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 C16orf59Q7L2K0 433 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 SMC5Q8IY18 1101 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 NSUN6Q8TEA1 469 aaKnown RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 FTOQ9C0B1 505 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS50-203ENST00000436177 NKX2-4Q9H2Z4 354 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 TRMT13Q9NUP7 481 aaKnown RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 MRPL11Q9Y3B7 192 aaKnown RBP9.05□□□□□ -0.96
VPS50-203ENST00000436177 PCDHGA10Q9Y5H3 936 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 GRIN2DO15399 1336 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 UMODL1Q5DID0 1318 aa9.05□□□□□ -0.96
VPS50-203ENST00000436177 RBM47A0AV96 593 aaKnown RBP9.04□□□□□ -0.96
VPS50-203ENST00000436177 B4E1Z4 1266 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 GH1P01241 217 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 COL9A1P20849 921 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 EDNRBP24530 442 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 RFC2P35250 354 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 NUCB1Q02818 461 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 TRAF1Q13077 416 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 MFSD10Q14728 455 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 TJAP1Q5JTD0 557 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 IFIT1BQ5T764 474 aaKnown RBP9.04□□□□□ -0.96
VPS50-203ENST00000436177 ARHGEF16Q5VV41 709 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 NFRKBQ6P4R8 1299 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 SEPT14Q6ZU15 432 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 FBXO11Q86XK2 927 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 PLEKHM2Q8IWE5 1019 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 SCLYQ96I15 445 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 RMDN3Q96TC7 470 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 MAF1Q9H063 256 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 WNT8AQ9H1J5 351 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
VPS50-203ENST00000436177 THEGQ9P2T0 379 aa9.04□□□□□ -0.96
VPS50-203ENST00000436177 ERICH2A1L162 156 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 A6NJR5 290 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 KCNJ6P48051 423 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 PTPN11Q06124 597 aaPredicted RBP9.03□□□□□ -0.96
VPS50-203ENST00000436177 SKIV2LQ15477 1246 aaKnown RBP9.03□□□□□ -0.96
VPS50-203ENST00000436177 STXBP2Q15833 593 aa9.03□□□□□ -0.96
VPS50-203ENST00000436177 TMEM67Q5HYA8 995 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms