RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MMEP08473 750 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 KIF5BP33176 963 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 WTAPQ15007 396 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 TTC38Q5R3I4 469 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ITFG2Q969R8 447 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 KDM4CQ9H3R0 1056 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 MLXIPLQ9NP71 852 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 SAMD15Q9P1V8 674 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 DEXIO95424 95 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 SRGNP10124 158 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 DHX9Q08211 1270 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 FAM69CQ0P6D2 419 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 LAMB3Q13751 1172 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CACNA2D4Q7Z3S7 1137 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 LONP2Q86WA8 852 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 NAPBQ9H115 298 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ATP4AP20648 1035 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CRACR2BQ8N4Y2 399 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 TMEM87BQ96K49 555 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 NDST4Q9H3R1 872 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ANKARQ7Z5J8 1434 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CHN1P15882 459 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 SLCO1A2P46721 670 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 PIK3AP1Q6ZUJ8 805 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ADAT2Q7Z6V5 191 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CD302Q8IX05 232 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CCDC155Q8N6L0 562 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF513Q8N8E2 541 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 B4GALNT2Q8NHY0 566 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 PPP1R12CQ9BZL4 782 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 SLC5A4Q9NY91 659 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CORO1CQ9ULV4 474 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 A0A1W2PQC6 194 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 H0Y3Z8 333 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 KRT18P05783 430 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 TRPM8Q7Z2W7 1104 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 TEKT4Q8WW24 435 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF496Q96IT1 587 aaPredicted RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 PCDHGC5Q9Y5F6 944 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 LRRC53A6NM62 1247 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ORC4O43929 436 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 KRT16P08779 473 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 TUBP50607 506 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 LRRC14Q15048 493 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 TAF4BQ92750 862 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ECT2Q9H8V3 914 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 PLCB1Q9NQ66 1216 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ZFYP08048 801 aaPredicted RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 NQO1P15559 274 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 HSPA9P38646 679 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 TNNC1P63316 161 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 RNASELQ05823 741 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ADSSL1Q8N142 457 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 LRRC45Q96CN5 670 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 L3MBTL3Q96JM7 780 aaPredicted RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 HOMER3Q9NSC5 361 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ARAP3Q8WWN8 1544 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 PDS5AQ29RF7 1337 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 TBC1D25Q3MII6 688 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 CCDC38Q502W7 563 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 NBPF5PQ86XG9 351 aaPredicted RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 EEF1GP26641 437 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 KRT2P35908 639 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 ITIH3Q06033 890 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 BLMHQ13867 455 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 RABL6Q3YEC7 729 aaPredicted RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 EZH1Q92800 747 aaPredicted RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 CELF4Q9BZC1 486 aaKnown RBP8.18□□□□□ -1.1
CPSF6-202ENST00000435070 RMND1Q9NWS8 449 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 AMACRQ9UHK6 382 aa8.18□□□□□ -1.1
CPSF6-202ENST00000435070 LRRD1A4D1F6 860 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PSMD1Q99460 953 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PRMT1Q99873 361 aaKnown RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 NAF1Q96HR8 494 aaKnown RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 KANSL2Q9H9L4 492 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF532Q9HCE3 1301 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 MINDY4BA8MYZ0 360 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PRKAB2O43741 272 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PRLRP16471 622 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ATP2A2P16615 1042 aaKnown RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 XBP1P17861 261 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ITGA6P23229 1130 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 KLRC1P26715 233 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 PPP1R15BQ5SWA1 713 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ANKRD40Q6AI12 368 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 FANCBQ8NB91 859 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 FERMT2Q96AC1 680 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 TTYH3Q9C0H2 523 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 BIN2Q9UBW5 565 aaPredicted RBP8.17□□□□□ -1.1
CPSF6-202ENST00000435070 ABCF2Q9UG63 623 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 TBC1D2BQ9UPU7 963 aa8.17□□□□□ -1.1
CPSF6-202ENST00000435070 WDR17Q8IZU2 1322 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms