RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 COL9A3Q14050 684 aaPredicted RBP25.97■■□□□ 1.75
HMG20B-205ENST00000435022 RAB30Q15771 203 aa25.97■■□□□ 1.75
HMG20B-205ENST00000435022 ARHGEF16Q5VV41 709 aa25.97■■□□□ 1.75
HMG20B-205ENST00000435022 CHST3Q7LGC8 479 aa25.97■■□□□ 1.75
HMG20B-205ENST00000435022 DEFB128Q7Z7B8 93 aa25.97■■□□□ 1.75
HMG20B-205ENST00000435022 RIOX1Q9H6W3 641 aa25.97■■□□□ 1.75
HMG20B-205ENST00000435022 PRDM6Q9NQX0 595 aa25.97■■□□□ 1.75
HMG20B-205ENST00000435022 BAZ2BQ9UIF8 2168 aaKnown RBP25.97■■□□□ 1.75
HMG20B-205ENST00000435022 PTPRSQ13332 1948 aa25.96■■□□□ 1.75
HMG20B-205ENST00000435022 HOXA13P31271 388 aaPredicted RBP25.96■■□□□ 1.75
HMG20B-205ENST00000435022 PTPN11Q06124 597 aaPredicted RBP25.96■■□□□ 1.75
HMG20B-205ENST00000435022 TROAPQ12815 778 aa25.96■■□□□ 1.75
HMG20B-205ENST00000435022 RPUSD2Q8IZ73 545 aaKnown RBP25.96■■□□□ 1.75
HMG20B-205ENST00000435022 DHX38Q92620 1227 aaKnown RBP25.96■■□□□ 1.75
HMG20B-205ENST00000435022 PIGSQ96S52 555 aa25.96■■□□□ 1.75
HMG20B-205ENST00000435022 PDCD2LQ9BRP1 358 aa25.96■■□□□ 1.75
HMG20B-205ENST00000435022 MTIF3Q9H2K0 278 aaKnown RBP25.96■■□□□ 1.75
HMG20B-205ENST00000435022 IQCF3P0C7M6 154 aa25.95■■□□□ 1.74
HMG20B-205ENST00000435022 GPNMBQ14956 572 aa25.95■■□□□ 1.74
HMG20B-205ENST00000435022 GDF6Q6KF10 455 aaPredicted RBP25.95■■□□□ 1.74
HMG20B-205ENST00000435022 MSRAQ9UJ68 235 aa25.95■■□□□ 1.74
HMG20B-205ENST00000435022 PCDHA1Q9Y5I3 950 aa25.95■■□□□ 1.74
HMG20B-205ENST00000435022 SLC4A7Q9Y6M7 1214 aa25.95■■□□□ 1.74
HMG20B-205ENST00000435022 U3KPZ7 1027 aaPredicted RBP25.95■■□□□ 1.74
HMG20B-205ENST00000435022 TRIP12Q14669 1992 aaPredicted RBP25.95■■□□□ 1.74
HMG20B-205ENST00000435022 MYH7BA7E2Y1 1941 aa25.94■■□□□ 1.74
HMG20B-205ENST00000435022 PITPNM1O00562 1244 aa25.94■■□□□ 1.74
HMG20B-205ENST00000435022 IFIT3O14879 490 aaKnown RBP25.94■■□□□ 1.74
HMG20B-205ENST00000435022 EIF3JO75822 258 aaKnown RBP25.94■■□□□ 1.74
HMG20B-205ENST00000435022 CHMP4BP1P59074 171 aa25.94■■□□□ 1.74
HMG20B-205ENST00000435022 SESTD1Q86VW0 696 aa25.94■■□□□ 1.74
HMG20B-205ENST00000435022 HOMER1Q86YM7 354 aa25.94■■□□□ 1.74
HMG20B-205ENST00000435022 MB21D2Q8IYB1 491 aaPredicted RBP25.94■■□□□ 1.74
HMG20B-205ENST00000435022 RUFY2Q8WXA3 655 aa25.94■■□□□ 1.74
HMG20B-205ENST00000435022 EMID1Q96A84 441 aaPredicted RBP25.94■■□□□ 1.74
HMG20B-205ENST00000435022 ZBBXA8MT70 800 aa25.93■■□□□ 1.74
HMG20B-205ENST00000435022 PFKMP08237 780 aa25.93■■□□□ 1.74
HMG20B-205ENST00000435022 GPKOWQ92917 476 aaPredicted RBP eCLIP25.93■■□□□ 1.74
HMG20B-205ENST00000435022 MAP4K1Q92918 833 aa25.93■■□□□ 1.74
HMG20B-205ENST00000435022 ZFP91Q96JP5 570 aaPredicted RBP25.93■■□□□ 1.74
HMG20B-205ENST00000435022 MYO9BQ13459 2157 aa25.93■■□□□ 1.74
HMG20B-205ENST00000435022 ATP2A2P16615 1042 aaKnown RBP25.92■■□□□ 1.74
HMG20B-205ENST00000435022 TRDNQ13061 729 aa25.92■■□□□ 1.74
HMG20B-205ENST00000435022 PGM5Q15124 567 aa25.92■■□□□ 1.74
HMG20B-205ENST00000435022 PTGISQ16647 500 aa25.92■■□□□ 1.74
HMG20B-205ENST00000435022 IGDCC4Q8TDY8 1250 aa25.92■■□□□ 1.74
HMG20B-205ENST00000435022 MRVI1Q9Y6F6 885 aa25.92■■□□□ 1.74
HMG20B-205ENST00000435022 HAS3O00219 553 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 ARHGEF15O94989 841 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 ZNF286BP0CG31 522 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 HOXD8P13378 290 aaPredicted RBP25.91■■□□□ 1.74
HMG20B-205ENST00000435022 SP2Q02086 613 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 WTAPQ15007 396 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 VSIG10LQ86VR7 867 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 NCOA7Q8NI08 942 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 SLC28A3Q9HAS3 691 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 PCDHA11Q9Y5I1 949 aa25.91■■□□□ 1.74
HMG20B-205ENST00000435022 SORBS3O60504 671 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 F2P00734 622 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 MYCLP12524 364 aaPredicted RBP25.9■■□□□ 1.74
HMG20B-205ENST00000435022 RFC2P35250 354 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 HIC1Q14526 733 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 TCTN1Q2MV58 587 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 PPTC7Q8NI37 304 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 WNT8BQ93098 351 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 GAS2L1Q99501 681 aaPredicted RBP25.9■■□□□ 1.74
HMG20B-205ENST00000435022 BCAS3Q9H6U6 928 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 MAP3K20Q9NYL2 800 aaKnown RBP25.9■■□□□ 1.74
HMG20B-205ENST00000435022 HDAC6Q9UBN7 1215 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 GTF2IRD1Q9UHL9 959 aa25.9■■□□□ 1.74
HMG20B-205ENST00000435022 RBM8AQ9Y5S9 174 aaKnown RBP25.9■■□□□ 1.74
HMG20B-205ENST00000435022 CASTP20810 708 aaKnown RBP25.89■■□□□ 1.74
HMG20B-205ENST00000435022 PSEN2P49810 448 aa25.89■■□□□ 1.74
HMG20B-205ENST00000435022 DGKDQ16760 1214 aa25.89■■□□□ 1.74
HMG20B-205ENST00000435022 HSDL1Q3SXM5 330 aa25.89■■□□□ 1.74
HMG20B-205ENST00000435022 TMEM67Q5HYA8 995 aa25.89■■□□□ 1.74
HMG20B-205ENST00000435022 RALYLQ86SE5 291 aaKnown RBP25.89■■□□□ 1.74
HMG20B-205ENST00000435022 MYL10Q9BUA6 226 aa25.89■■□□□ 1.74
HMG20B-205ENST00000435022 FRMPD4Q14CM0 1322 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 REV3LO60673 3130 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 UBA1P22314 1058 aaKnown RBP25.88■■□□□ 1.73
HMG20B-205ENST00000435022 RBL2Q08999 1139 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 BFSP2Q13515 415 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 MYSM1Q5VVJ2 828 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 PPP2R2DQ66LE6 453 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 TRAF7Q6Q0C0 670 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 PPM1EQ8WY54 764 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 ALG1Q9BT22 464 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 LY9Q9HBG7 655 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 NOD1Q9Y239 953 aa25.88■■□□□ 1.73
HMG20B-205ENST00000435022 PNMA6FA0A0J9YX94 578 aa25.87■■□□□ 1.73
HMG20B-205ENST00000435022 ZNF200P98182 395 aaPredicted RBP25.87■■□□□ 1.73
HMG20B-205ENST00000435022 LAMC2Q13753 1193 aa25.87■■□□□ 1.73
HMG20B-205ENST00000435022 MFSD10Q14728 455 aa25.87■■□□□ 1.73
HMG20B-205ENST00000435022 TRIM71Q2Q1W2 868 aaKnown RBP25.87■■□□□ 1.73
HMG20B-205ENST00000435022 CELF3Q5SZQ8 465 aaKnown RBP25.87■■□□□ 1.73
HMG20B-205ENST00000435022 DHX37Q8IY37 1157 aaKnown RBP25.87■■□□□ 1.73
HMG20B-205ENST00000435022 SAMD3Q8N6K7 520 aa25.87■■□□□ 1.73
HMG20B-205ENST00000435022 RETREG2Q8NC44 543 aa25.87■■□□□ 1.73
HMG20B-205ENST00000435022 LSG1Q9H089 658 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms