RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
PTCD1-204ENST00000430982 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
PTCD1-204ENST00000430982 GBF1Q92538 1859 aa17.56■□□□□ 0.4
PTCD1-204ENST00000430982 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
PTCD1-204ENST00000430982 SEC24BO95487 1268 aa17.55■□□□□ 0.4
PTCD1-204ENST00000430982 CSF2RAP15509 400 aa17.55■□□□□ 0.4
PTCD1-204ENST00000430982 METAP2P50579 478 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■■■□□ 15.4
PTCD1-204ENST00000430982 PSRC1Q6PGN9 363 aaPredicted RBP17.55■□□□□ 0.4
PTCD1-204ENST00000430982 TAAR1Q96RJ0 339 aa17.55■□□□□ 0.4
PTCD1-204ENST00000430982 MAF1Q9H063 256 aa17.55■□□□□ 0.4
PTCD1-204ENST00000430982 KATNBL1Q9H079 304 aa17.55■□□□□ 0.4
PTCD1-204ENST00000430982 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
PTCD1-204ENST00000430982 LOC102724159A0A0B4J2E5 919 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 MYADML2A6NDP7 307 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 B4DLN1 442 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 OPLAHO14841 1288 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 BMP1P13497 986 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
PTCD1-204ENST00000430982 RCAN1P53805 252 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 PDE4DQ08499 809 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 PWP2Q15269 919 aaKnown RBP17.54■□□□□ 0.4
PTCD1-204ENST00000430982 KCNA10Q16322 511 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 CCDC144BQ3MJ40 725 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
PTCD1-204ENST00000430982 FAM126BQ8IXS8 530 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 FBXL16Q8N461 479 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 DNERQ8NFT8 737 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 MORC4Q8TE76 937 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 C1QTNF1Q9BXJ1 281 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 AGXT2Q9BYV1 514 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 COL20A1Q9P218 1284 aa17.54■□□□□ 0.4
PTCD1-204ENST00000430982 CNTNAP5Q8WYK1 1306 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 GCOM1H8Y6P7 765 aaPredicted RBP17.53■□□□□ 0.4
PTCD1-204ENST00000430982 POLR2MP0CAP2 368 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 CDC27P30260 824 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
PTCD1-204ENST00000430982 HSD17B4P51659 736 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 ANAPC15P60006 121 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 RAB30Q15771 203 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 TMEM199Q8N511 208 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 HERVK_113Q902F9 699 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 RMDN3Q96TC7 470 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
PTCD1-204ENST00000430982 FAM217BQ9NTX9 383 aaPredicted RBP17.53■□□□□ 0.4
PTCD1-204ENST00000430982 CCDC196A0A1B0GTZ2 297 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 DUSP11O75319 330 aaKnown RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 CD4P01730 458 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 EIF2AK2P19525 551 aaKnown RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 ADD1P35611 737 aaKnown RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 NKX3-2P78367 333 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 TNFAIP2Q03169 654 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 C8orf34Q49A92 452 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 HEATR3Q7Z4Q2 680 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 GLT1D1Q96MS3 346 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 UPF3AQ9H1J1 476 aaKnown RBP17.52■□□□□ 0.4
PTCD1-204ENST00000430982 PDGFCQ9NRA1 345 aa17.52■□□□□ 0.4
PTCD1-204ENST00000430982 ADCY6O43306 1168 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 EDNRBP24530 442 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-204ENST00000430982 GHRHRQ02643 423 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 FUT2Q10981 343 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 PPP2R5BQ15173 497 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 CCDC85BQ15834 202 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-204ENST00000430982 TAPT1Q6NXT6 567 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 FCHSD1Q86WN1 690 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 SAMD3Q8N6K7 520 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 GPKOWQ92917 476 aaPredicted RBP eCLIP17.51■□□□□ 0.398e-6■■□□□ 13.6
PTCD1-204ENST00000430982 IL23AQ9NPF7 189 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 MAP3K20Q9NYL2 800 aaKnown RBP17.51■□□□□ 0.39
PTCD1-204ENST00000430982 BAZ2BQ9UIF8 2168 aaKnown RBP17.51■□□□□ 0.39
PTCD1-204ENST00000430982 MSRAQ9UJ68 235 aa17.51■□□□□ 0.39
PTCD1-204ENST00000430982 YBX2Q9Y2T7 364 aaKnown RBP17.51■□□□□ 0.39
PTCD1-204ENST00000430982 V9GY48 417 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-204ENST00000430982 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
PTCD1-204ENST00000430982 ARVCFO00192 962 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 ACRP10323 421 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 SMPD1P17405 629 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 PDIA3P30101 505 aaKnown RBP17.5■□□□□ 0.39
PTCD1-204ENST00000430982 GJA9P57773 515 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 CCT2P78371 535 aaKnown RBP17.5■□□□□ 0.39
PTCD1-204ENST00000430982 IQSEC1Q6DN90 963 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 CUL5Q93034 780 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 NECAB3Q96P71 396 aaPredicted RBP17.5■□□□□ 0.39
PTCD1-204ENST00000430982 NKX2-4Q9H2Z4 354 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 LCTP09848 1927 aa17.5■□□□□ 0.39
PTCD1-204ENST00000430982 MYH6P13533 1939 aa17.49■□□□□ 0.39
PTCD1-204ENST00000430982 CTAGE5O15320 804 aa17.49■□□□□ 0.39
PTCD1-204ENST00000430982 ASGR1P07306 291 aa17.49■□□□□ 0.39
PTCD1-204ENST00000430982 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
PTCD1-204ENST00000430982 IGFBP4P22692 258 aa17.49■□□□□ 0.39
PTCD1-204ENST00000430982 SLC43A3Q8NBI5 491 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms